1kby: Difference between revisions

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[[Image:1kby.png|left|200px]]


{{STRUCTURE_1kby|  PDB=1kby  |  SCENE=  }}
==Structure of Photosynthetic Reaction Center with bacteriochlorophyll-bacteriopheophytin heterodimer==
 
<StructureSection load='1kby' size='340' side='right'caption='[[1kby]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
===Structure of Photosynthetic Reaction Center with bacteriochlorophyll-bacteriopheophytin heterodimer===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1kby]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Cereibacter_sphaeroides Cereibacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KBY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KBY FirstGlance]. <br>
{{ABSTRACT_PUBMED_16228547}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCL:BACTERIOCHLOROPHYLL+A'>BCL</scene>, <scene name='pdbligand=BPH:BACTERIOPHEOPHYTIN+A'>BPH</scene>, <scene name='pdbligand=CDL:CARDIOLIPIN'>CDL</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=SPO:SPHEROIDENE'>SPO</scene>, <scene name='pdbligand=U10:UBIQUINONE-10'>U10</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kby FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kby OCA], [https://pdbe.org/1kby PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kby RCSB], [https://www.ebi.ac.uk/pdbsum/1kby PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kby ProSAT]</span></td></tr>
[[1kby]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides Rhodobacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KBY OCA].  
</table>
 
== Function ==
==Reference==
[https://www.uniprot.org/uniprot/RCEL_CERSP RCEL_CERSP] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
<ref group="xtra">PMID:016228547</ref><references group="xtra"/>
== Evolutionary Conservation ==
[[Category: Rhodobacter sphaeroides]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Allen, J P.]]
Check<jmol>
[[Category: Camara-Artigas, A.]]
  <jmolCheckbox>
[[Category: Goetsch, A.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kb/1kby_consurf.spt"</scriptWhenChecked>
[[Category: Magee, C.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Photosynthesis]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Transmembrane alpha helix]]
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1kby ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Cereibacter sphaeroides]]
[[Category: Large Structures]]
[[Category: Allen JP]]
[[Category: Camara-Artigas A]]
[[Category: Goetsch A]]
[[Category: Magee C]]

Latest revision as of 10:45, 7 February 2024

Structure of Photosynthetic Reaction Center with bacteriochlorophyll-bacteriopheophytin heterodimerStructure of Photosynthetic Reaction Center with bacteriochlorophyll-bacteriopheophytin heterodimer

Structural highlights

1kby is a 3 chain structure with sequence from Cereibacter sphaeroides. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.5Å
Ligands:, , , , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RCEL_CERSP The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1kby, resolution 2.50Å

Drag the structure with the mouse to rotate

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OCA