1k6d: Difference between revisions

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[[Image:1k6d.png|left|200px]]


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==CRYSTAL STRUCTURE OF ACETATE COA-TRANSFERASE ALPHA SUBUNIT==
The line below this paragraph, containing "STRUCTURE_1k6d", creates the "Structure Box" on the page.
<StructureSection load='1k6d' size='340' side='right'caption='[[1k6d]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1k6d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K6D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K6D FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_1k6d|  PDB=1k6d  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k6d OCA], [https://pdbe.org/1k6d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k6d RCSB], [https://www.ebi.ac.uk/pdbsum/1k6d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k6d ProSAT], [https://www.topsan.org/Proteins/MCSG/1k6d TOPSAN]</span></td></tr>
 
</table>
===CRYSTAL STRUCTURE OF ACETATE COA-TRANSFERASE ALPHA SUBUNIT===
== Function ==
 
[https://www.uniprot.org/uniprot/ATOD_ECOLI ATOD_ECOLI]  
 
== Evolutionary Conservation ==
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The line below this paragraph, {{ABSTRACT_PUBMED_12454473}}, adds the Publication Abstract to the page
Check<jmol>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k6/1k6d_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_12454473}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1K6D is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K6D OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k6d ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Autotracing of Escherichia coli acetate CoA-transferase alpha-subunit structure using 3.4 A MAD and 1.9 A native data., Korolev S, Koroleva O, Petterson K, Gu M, Collart F, Dementieva I, Joachimiak A, Acta Crystallogr D Biol Crystallogr. 2002 Dec;58(Pt 12):2116-21. Epub 2002, Nov 23. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12454473 12454473]
</StructureSection>
[[Category: Acetate CoA-transferase]]
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Collart, F.]]
[[Category: Large Structures]]
[[Category: Dementieva, I.]]
[[Category: Collart F]]
[[Category: Joachimiak, A.]]
[[Category: Dementieva I]]
[[Category: Korolev, S.]]
[[Category: Joachimiak A]]
[[Category: Koroleva, O.]]
[[Category: Korolev S]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Koroleva O]]
[[Category: Petterson, K.]]
[[Category: Petterson K]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 18:23:31 2008''

Latest revision as of 10:44, 7 February 2024

CRYSTAL STRUCTURE OF ACETATE COA-TRANSFERASE ALPHA SUBUNITCRYSTAL STRUCTURE OF ACETATE COA-TRANSFERASE ALPHA SUBUNIT

Structural highlights

1k6d is a 2 chain structure with sequence from Escherichia coli. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

ATOD_ECOLI

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1k6d, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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