1jku: Difference between revisions

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-[[Image:1jku.png|left|200px]]
-<!--
+==Crystal Structure of Manganese Catalase from Lactobacillus plantarum==
-The line below this paragraph, containing "STRUCTURE_1jku", creates the "Structure Box" on the page.
+<StructureSection load='1jku' size='340' side='right'caption='[[1jku]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1jku]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactiplantibacillus_plantarum Lactiplantibacillus plantarum]. The September 2004 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Catalase''  by David S. Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2004_9 10.2210/rcsb_pdb/mom_2004_9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JKU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JKU FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MN3:MANGANESE+(III)+ION'>MN3</scene>, <scene name='pdbligand=OH:HYDROXIDE+ION'>OH</scene></td></tr>
-{{STRUCTURE_1jku|  PDB=1jku  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jku FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jku OCA], [https://pdbe.org/1jku PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jku RCSB], [https://www.ebi.ac.uk/pdbsum/1jku PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jku ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/MCAT_LACPN MCAT_LACPN]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jk/1jku_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jku ConSurf].
+<div style="clear:both"></div>
-'''Crystal Structure of Manganese Catalase from Lactobacillus plantarum'''
+==See Also==
+*[[Catalase|Catalase]]
+*[[Catalase 3D structures|Catalase 3D structures]]
-{{ABSTRACT_11587647}}
+__TOC__
+</StructureSection>
-==About this Structure==
-JKU is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Lactobacillus_plantarum Lactobacillus plantarum]. The following page contains interesting information on the relation of 1JKU with [[http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/pdb57_1.html Catalase]]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JKU OCA].
 [[Category: Catalase]]
-[[Category: Lactobacillus plantarum]]
+[[Category: Lactiplantibacillus plantarum]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Antonyuk, S V.]]
+[[Category: RCSB PDB Molecule of the Month]]
-[[Category: Artymiuk, P J.]]
+[[Category: Antonyuk SV]]
-[[Category: Barynin, V V.]]
+[[Category: Artymiuk PJ]]
-[[Category: Harrison, P M.]]
+[[Category: Barynin VV]]
-[[Category: Lamzin, V S.]]
+[[Category: Harrison PM]]
-[[Category: Whittaker, J W.]]
+[[Category: Lamzin VS]]
-[[Category: Whittaker, M M.]]
+[[Category: Whittaker JW]]
-[[Category: Catalase dimanganese]]
+[[Category: Whittaker MM]]
-[[Category: Hexamer]]
-[[Category: Metalloenzyme]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jun 26 17:36:04 2008''