1j9t: Difference between revisions

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{{Seed}}
[[Image:1j9t.png|left|200px]]


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==Crystal structure of nitrite soaked reduced H255N AFNIR==
The line below this paragraph, containing "STRUCTURE_1j9t", creates the "Structure Box" on the page.
<StructureSection load='1j9t' size='340' side='right'caption='[[1j9t]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1j9t]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Alcaligenes_faecalis Alcaligenes faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J9T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J9T FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NO2:NITRITE+ION'>NO2</scene></td></tr>
{{STRUCTURE_1j9t| PDB=1j9t |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j9t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j9t OCA], [https://pdbe.org/1j9t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j9t RCSB], [https://www.ebi.ac.uk/pdbsum/1j9t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j9t ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/NIR_ALCFA NIR_ALCFA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j9/1j9t_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j9t ConSurf].
<div style="clear:both"></div>


===Crystal structure of nitrite soaked reduced H255N AFNIR===
==See Also==
 
*[[Nitrite reductase 3D structures|Nitrite reductase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_11478880}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 11478880 is the PubMed ID number.
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{{ABSTRACT_PUBMED_11478880}}
 
==About this Structure==
1J9T is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Alcaligenes_faecalis Alcaligenes faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J9T OCA].
 
==Reference==
Alternate substrate binding modes to two mutant (D98N and H255N) forms of nitrite reductase from Alcaligenes faecalis S-6: structural model of a transient catalytic intermediate., Boulanger MJ, Murphy ME, Biochemistry. 2001 Aug 7;40(31):9132-41. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11478880 11478880]
[[Category: Alcaligenes faecalis]]
[[Category: Alcaligenes faecalis]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Boulanger, M J.]]
[[Category: Boulanger MJ]]
[[Category: Murphy, M E.]]
[[Category: Murphy ME]]
[[Category: Cupredoxin fold nitrite copper]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 14:45:44 2008''

Latest revision as of 10:38, 7 February 2024

Crystal structure of nitrite soaked reduced H255N AFNIRCrystal structure of nitrite soaked reduced H255N AFNIR

Structural highlights

1j9t is a 3 chain structure with sequence from Alcaligenes faecalis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.95Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

NIR_ALCFA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1j9t, resolution 1.95Å

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