1j8m: Difference between revisions

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[[Image:1j8m.png|left|200px]]


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==Signal Recognition Particle conserved GTPase domain from A. ambivalens==
The line below this paragraph, containing "STRUCTURE_1j8m", creates the "Structure Box" on the page.
<StructureSection load='1j8m' size='340' side='right'caption='[[1j8m]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1j8m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acidianus_ambivalens Acidianus ambivalens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J8M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J8M FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j8m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j8m OCA], [https://pdbe.org/1j8m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j8m RCSB], [https://www.ebi.ac.uk/pdbsum/1j8m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j8m ProSAT]</span></td></tr>
{{STRUCTURE_1j8m| PDB=1j8m |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/SRP54_ACIAM SRP54_ACIAM] Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j8/1j8m_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j8m ConSurf].
<div style="clear:both"></div>


===Signal Recognition Particle conserved GTPase domain from A. ambivalens===
==See Also==
 
*[[Signal recognition particle 3D structures|Signal recognition particle 3D structures]]
 
__TOC__
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{{ABSTRACT_PUBMED_10801496}}
 
==About this Structure==
1J8M is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Acidianus_ambivalens Acidianus ambivalens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J8M OCA].
 
==Reference==
<ref group="xtra">PMID:10801496</ref><references group="xtra"/>
[[Category: Acidianus ambivalens]]
[[Category: Acidianus ambivalens]]
[[Category: Kaat, K te.]]
[[Category: Large Structures]]
[[Category: Moll, R.]]
[[Category: Moll R]]
[[Category: Montoya, G.]]
[[Category: Montoya G]]
[[Category: Schafer, G.]]
[[Category: Schafer G]]
[[Category: Sinning, I.]]
[[Category: Sinning I]]
[[Category: Signaling protein]]
[[Category: Te Kaat K]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 04:45:57 2009''

Latest revision as of 10:37, 7 February 2024

Signal Recognition Particle conserved GTPase domain from A. ambivalensSignal Recognition Particle conserved GTPase domain from A. ambivalens

Structural highlights

1j8m is a 1 chain structure with sequence from Acidianus ambivalens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

SRP54_ACIAM Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1j8m, resolution 2.00Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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