1iuz: Difference between revisions

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-[[Image:1iuz.gif|left|200px]]<br />
-<applet load="1iuz" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="1iuz, resolution 1.6&Aring;" />
-'''PLASTOCYANIN'''<br />
-==Overview==
+==PLASTOCYANIN==
-The crystal structure of plastocyanin from a green alga, Ulva pertusa, has, been determined at 1.6-A resolution. At its copper site, U. pertusa, plastocyanin has a distorted tetrahedral coordination geometry similar to, other plastocyanins. In comparison with structures of plastocyanins, reported formerly, a Cu(II)-Sdelta(Met92) bond distance (2.69 A) is, shorter by about 0.2 A and a Cu(II)-Sgamma(Cys84) distance is longer by, less than 0.1 A in U. pertusa plastocyanin. These subtle but significant, differences are caused by the structural change at a His-Met loop, (His87-Met92) due to an absence of a O(Asp85)-Ogamma(Ser88) hydrogen bond, which is found in Enteromorpha prolifera plastocyanin. In addition, poplar, and Chlamydomonas reinhardtii plastocyanins with a glutamine at residue 88, ... [[http://ispc.weizmann.ac.il/pmbin/getpm?9933621 (full description)]]
+<StructureSection load='1iuz' size='340' side='right'caption='[[1iuz]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1iuz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ulva_pertusa Ulva pertusa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IUZ FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1iuz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iuz OCA], [https://pdbe.org/1iuz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1iuz RCSB], [https://www.ebi.ac.uk/pdbsum/1iuz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1iuz ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/PLAS_ULVPE PLAS_ULVPE] Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Has antiviral activity against Potato virus Y (strain N).
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iu/1iuz_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1iuz ConSurf].
+<div style="clear:both"></div>
-==About this Structure==
+==See Also==
-IUZ is a [[http://en.wikipedia.org/wiki/Single_protein Single protein]] structure of sequence from [[http://en.wikipedia.org/wiki/Ulva_pertusa Ulva pertusa]] with CU and SO4 as [[http://en.wikipedia.org/wiki/ligands ligands]]. Structure known Active Site: COP. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1IUZ OCA]].
+*[[Plastocyanin 3D structures|Plastocyanin 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-Novel insight into the copper-ligand geometry in the crystal structure of Ulva pertusa plastocyanin at 1.6-A resolution. Structural basis for regulation of the copper site by residue 88., Shibata N, Inoue T, Nagano C, Nishio N, Kohzuma T, Onodera K, Yoshizaki F, Sugimura Y, Kai Y, J Biol Chem. 1999 Feb 12;274(7):4225-30. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9933621 9933621]
+[[Category: Large Structures]]
-[[Category: Single protein]]
 [[Category: Ulva pertusa]]
-[[Category: Shibata, N.]]
+[[Category: Shibata N]]
-[[Category: CU]]
-[[Category: SO4]]
-[[Category: electron transport]]
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Oct 30 11:29:33 2007''