1iib: Difference between revisions

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-{{Seed}}
-[[Image:1iib.png|left|200px]]
-<!--
+==CRYSTAL STRUCTURE OF IIBCELLOBIOSE FROM ESCHERICHIA COLI==
-The line below this paragraph, containing "STRUCTURE_1iib", creates the "Structure Box" on the page.
+<StructureSection load='1iib' size='340' side='right'caption='[[1iib]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1iib]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IIB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IIB FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1iib FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iib OCA], [https://pdbe.org/1iib PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1iib RCSB], [https://www.ebi.ac.uk/pdbsum/1iib PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1iib ProSAT]</span></td></tr>
-{{STRUCTURE_1iib|  PDB=1iib  |  SCENE=  }}
+</table>
+== Function ==
-===CRYSTAL STRUCTURE OF IIBCELLOBIOSE FROM ESCHERICHIA COLI===
+[https://www.uniprot.org/uniprot/PTQB_ECOLI PTQB_ECOLI] The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This system is involved in N,N'-diacetylchitobiose transport.<ref>PMID:10913117</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-<!--
+Check<jmol>
-The line below this paragraph, {{ABSTRACT_PUBMED_9032081}}, adds the Publication Abstract to the page
+  <jmolCheckbox>
-(as it appears on PubMed at http://www.pubmed.gov), where 9032081 is the PubMed ID number.
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ii/1iib_consurf.spt"</scriptWhenChecked>
--->
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-{{ABSTRACT_PUBMED_9032081}}
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
-==About this Structure==
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1iib ConSurf].
-IIB is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IIB OCA].
+<div style="clear:both"></div>
+== References ==
-==Reference==
+<references/>
-The structure of an energy-coupling protein from bacteria, IIBcellobiose, reveals similarity to eukaryotic protein tyrosine phosphatases., van Montfort RL, Pijning T, Kalk KH, Reizer J, Saier MH Jr, Thunnissen MM, Robillard GT, Dijkstra BW, Structure. 1997 Feb 15;5(2):217-25. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9032081 9032081]
+__TOC__
-[[Category: Escherichia coli]]
+</StructureSection>
-[[Category: Single protein]]
+[[Category: Escherichia coli K-12]]
-[[Category: Dijkstra, B W.]]
+[[Category: Large Structures]]
-[[Category: Kalk, K H.]]
+[[Category: Dijkstra BW]]
-[[Category: Montfort, R L.M Van.]]
+[[Category: Kalk KH]]
-[[Category: Pijning, T.]]
+[[Category: Pijning T]]
-[[Category: Reizer, J.]]
+[[Category: Reizer J]]
-[[Category: Robillard, G T.]]
+[[Category: Robillard GT]]
-[[Category: Saier, M H.]]
+[[Category: Saier MH]]
-[[Category: Thunnissen, M M.G M.]]
+[[Category: Thunnissen MMGM]]
-[[Category: Cysteine phosphorylation]]
+[[Category: Van Montfort RLM]]
-[[Category: Iib enzyme]]
-[[Category: Phosphoenolpyruvate dependent phosphotransferase system]]
-[[Category: Phosphotransferase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 12:15:29 2008''