1feu: Difference between revisions

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[[Image:1feu.png|left|200px]]


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==CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA.==
The line below this paragraph, containing "STRUCTURE_1feu", creates the "Structure Box" on the page.
<StructureSection load='1feu' size='340' side='right'caption='[[1feu]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1feu]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FEU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FEU FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_1feu| PDB=1feu |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1feu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1feu OCA], [https://pdbe.org/1feu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1feu RCSB], [https://www.ebi.ac.uk/pdbsum/1feu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1feu ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RL25_THETH RL25_THETH] This is one of 3 proteins that mediate the attachment of the 5S rRNA onto the large ribosomal subunit.<ref>PMID:10356982</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fe/1feu_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1feu ConSurf].
<div style="clear:both"></div>


===CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA.===
==See Also==
 
*[[Ribosomal protein L25|Ribosomal protein L25]]
 
== References ==
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[[Category: Large Structures]]
{{ABSTRACT_PUBMED_11418764}}
 
==About this Structure==
1FEU is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FEU OCA].
 
==Reference==
Structure of ribosomal protein TL5 complexed with RNA provides new insights into the CTC family of stress proteins., Fedorov R, Meshcheryakov V, Gongadze G, Fomenkova N, Nevskaya N, Selmer M, Laurberg M, Kristensen O, Al-Karadaghi S, Liljas A, Garber M, Nikonov S, Acta Crystallogr D Biol Crystallogr. 2001 Jul;57(Pt 7):968-76. Epub 2001, Jun 21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11418764 11418764]
[[Category: Single protein]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Al-Karadaghi, S.]]
[[Category: Al-Karadaghi S]]
[[Category: Fedorov, R V.]]
[[Category: Fedorov RV]]
[[Category: Fomenkova, N P.]]
[[Category: Fomenkova NP]]
[[Category: Garber, M B.]]
[[Category: Garber MB]]
[[Category: Gongadze, G M.]]
[[Category: Gongadze GM]]
[[Category: Kristensen, O.]]
[[Category: Kristensen O]]
[[Category: Laurberg, M.]]
[[Category: Laurberg M]]
[[Category: Liljas, A.]]
[[Category: Liljas A]]
[[Category: Meshcheryakov, V A.]]
[[Category: Meshcheryakov VA]]
[[Category: Nevskaya, N A.]]
[[Category: Nevskaya NA]]
[[Category: Nikonov, S V.]]
[[Category: Nikonov SV]]
[[Category: Selmer, M.]]
[[Category: Selmer M]]
[[Category: 5s rrna-protein complex]]
[[Category: Cadmium ion]]
[[Category: General stress protein ctc]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 03:08:22 2008''

Latest revision as of 10:13, 7 February 2024

CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA.CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA.

Structural highlights

1feu is a 6 chain structure with sequence from Thermus thermophilus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.3Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RL25_THETH This is one of 3 proteins that mediate the attachment of the 5S rRNA onto the large ribosomal subunit.[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

References

  1. ↑ Gongadze GM, Meshcheryakov VA, Serganov AA, Fomenkova NP, Mudrik ES, Jonsson BH, Liljas A, Nikonov SV, Garber MB. N-terminal domain, residues 1-91, of ribosomal protein TL5 from Thermus thermophilus binds specifically and strongly to the region of 5S rRNA containing loop E. FEBS Lett. 1999 May 14;451(1):51-5. PMID:10356982

1feu, resolution 2.30Å

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