1f5j: Difference between revisions

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[[Image:1f5j.png|left|200px]]


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==CRYSTAL STRUCTURE OF XYNB, A HIGHLY THERMOSTABLE BETA-1,4-XYLANASE FROM DICTYOGLOMUS THERMOPHILUM RT46B.1, AT 1.8 A RESOLUTION==
The line below this paragraph, containing "STRUCTURE_1f5j", creates the "Structure Box" on the page.
<StructureSection load='1f5j' size='340' side='right'caption='[[1f5j]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1f5j]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Dictyoglomus_thermophilum Dictyoglomus thermophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F5J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1F5J FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_1f5j|  PDB=1f5j  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1f5j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f5j OCA], [https://pdbe.org/1f5j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1f5j RCSB], [https://www.ebi.ac.uk/pdbsum/1f5j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1f5j ProSAT]</span></td></tr>
 
</table>
===CRYSTAL STRUCTURE OF XYNB, A HIGHLY THERMOSTABLE BETA-1,4-XYLANASE FROM DICTYOGLOMUS THERMOPHILUM RT46B.1, AT 1.8 A RESOLUTION===
== Function ==
 
[https://www.uniprot.org/uniprot/P77853_DICTH P77853_DICTH]
 
== Evolutionary Conservation ==
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f5/1f5j_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_11053833}}
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    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1F5J is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Dictyoglomus_thermophilum Dictyoglomus thermophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F5J OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1f5j ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Structure of XynB, a highly thermostable beta-1,4-xylanase from Dictyoglomus thermophilum Rt46B.1, at 1.8 A resolution., McCarthy AA, Morris DD, Bergquist PL, Baker EN, Acta Crystallogr D Biol Crystallogr. 2000 Nov;56(Pt 11):1367-75. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11053833 11053833]
</StructureSection>
[[Category: Dictyoglomus thermophilum]]
[[Category: Dictyoglomus thermophilum]]
[[Category: Endo-1,4-beta-xylanase]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Baker EN]]
[[Category: Baker, E N.]]
[[Category: McCarthy AA]]
[[Category: McCarthy, A A.]]
[[Category: Beta-barrel]]
[[Category: Xylanase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 02:43:45 2008''

Latest revision as of 10:10, 7 February 2024

CRYSTAL STRUCTURE OF XYNB, A HIGHLY THERMOSTABLE BETA-1,4-XYLANASE FROM DICTYOGLOMUS THERMOPHILUM RT46B.1, AT 1.8 A RESOLUTIONCRYSTAL STRUCTURE OF XYNB, A HIGHLY THERMOSTABLE BETA-1,4-XYLANASE FROM DICTYOGLOMUS THERMOPHILUM RT46B.1, AT 1.8 A RESOLUTION

Structural highlights

1f5j is a 2 chain structure with sequence from Dictyoglomus thermophilum. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.8Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

P77853_DICTH

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1f5j, resolution 1.80Å

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