1f2y: Difference between revisions

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-[[Image:1f2y.jpg|left|200px]]
- {{Structure
+==SIMPLIFICATION OF A PROTEIN LOOP IN STAPHYLOCOCCAL NUCLEASE==
-|PDB= 1f2y |SIZE=350|CAPTION= <scene name='initialview01'>1f2y</scene>, resolution 2.00&Aring;
+<StructureSection load='1f2y' size='340' side='right'caption='[[1f2y]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND=
+<table><tr><td colspan='2'>[[1f2y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F2Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1F2Y FirstGlance]. <br>
-|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-|GENE=
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1f2y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f2y OCA], [https://pdbe.org/1f2y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1f2y RCSB], [https://www.ebi.ac.uk/pdbsum/1f2y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1f2y ProSAT]</span></td></tr>
-|DOMAIN=
+</table>
-|RELATEDENTRY=[[1eqv|1EQV]], [[1f2m|1F2M]], [[1stn|1STN]], [[1f2z|1F2Z]]
+== Function ==
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1f2y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f2y OCA], [http://www.ebi.ac.uk/pdbsum/1f2y PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1f2y RCSB]</span>
+[https://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.
-}}
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f2/1f2y_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1f2y ConSurf].
+<div style="clear:both"></div>
-'''SIMPLIFICATION OF A PROTEIN LOOP IN STAPHYLOCOCCAL NUCLEASE'''
+==See Also==
+*[[Staphylococcal nuclease 3D structures|Staphylococcal nuclease 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-F2Y is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F2Y OCA].
+[[Category: Large Structures]]
-[[Category: Micrococcal nuclease]]
-[[Category: Single protein]]
 [[Category: Staphylococcus aureus]]
-[[Category: Adelman, D M.]]
+[[Category: Adelman DM]]
-[[Category: Fox, R O.]]
+[[Category: Fox RO]]
-[[Category: Harkins, P C.]]
+[[Category: Harkins PC]]
-[[Category: Hodel, A.]]
+[[Category: Hodel A]]
-[[Category: White, M A.]]
+[[Category: White MA]]
-[[Category: cis - trans isomerization]]
-[[Category: cis peptide]]
-[[Category: protein engineering]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 20:14:48 2008''