1f15: Difference between revisions

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-{{Seed}}
-[[Image:1f15.png|left|200px]]
-<!--
+==CUCUMBER MOSAIC VIRUS (STRAIN FNY)==
-The line below this paragraph, containing "STRUCTURE_1f15", creates the "Structure Box" on the page.
+<StructureSection load='1f15' size='340' side='right'caption='[[1f15]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1f15]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Cucumber_mosaic_virus_(strain_FNY) Cucumber mosaic virus (strain FNY)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F15 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1F15 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1f15 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f15 OCA], [https://pdbe.org/1f15 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1f15 RCSB], [https://www.ebi.ac.uk/pdbsum/1f15 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1f15 ProSAT]</span></td></tr>
-{{STRUCTURE_1f15|  PDB=1f15  |  SCENE=  }}
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/CAPSD_CMVFN CAPSD_CMVFN] Capsid protein. Probably binds RNA and plays a role in packaging (By similarity).
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f1/1f15_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1f15 ConSurf].
+<div style="clear:both"></div>
-===CUCUMBER MOSAIC VIRUS (STRAIN FNY)===
+==See Also==
+*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_10906212}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 10906212 is the PubMed ID number.
+[[Category: Chase E]]
--->
+[[Category: Perry K]]
-{{ABSTRACT_PUBMED_10906212}}
+[[Category: Schmidt T]]
+[[Category: Smith TJ]]
-==About this Structure==
-F15 is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Cucumber_mosaic_virus Cucumber mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F15 OCA].
-==Reference==
-<ref group="xtra">PMID:10906212</ref><references group="xtra"/>
-[[Category: Cucumber mosaic virus]]
-[[Category: Chase, E.]]
-[[Category: Perry, K.]]
-[[Category: Schmidt, T.]]
-[[Category: Smith, T J.]]
-[[Category: Beta barrel]]
-[[Category: Icosahedral virus]]
-[[Category: Virus]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 21:28:57 2009''