1ewa: Difference between revisions

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OCA

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-{{Seed}}
-[[Image:1ewa.png|left|200px]]
-<!--
+==Dehaloperoxidase and 4-iodophenol==
-The line below this paragraph, containing "STRUCTURE_1ewa", creates the "Structure Box" on the page.
+<StructureSection load='1ewa' size='340' side='right'caption='[[1ewa]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1ewa]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Amphitrite_ornata Amphitrite ornata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EWA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EWA FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=IOL:4-IODOPHENOL'>IOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_1ewa|  PDB=1ewa  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ewa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ewa OCA], [https://pdbe.org/1ewa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ewa RCSB], [https://www.ebi.ac.uk/pdbsum/1ewa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ewa ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q9NAV8_9ANNE Q9NAV8_9ANNE]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ew/1ewa_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ewa ConSurf].
+<div style="clear:both"></div>
-===Dehaloperoxidase and 4-iodophenol===
+==See Also==
+*[[Dehaloperoxidase 3D structures|Dehaloperoxidase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_10751397}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 10751397 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_10751397}}
-==About this Structure==
-EWA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Amphitrite_ornata Amphitrite ornata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EWA OCA].
-==Reference==
-The crystal structure and amino acid sequence of dehaloperoxidase from Amphitrite ornata indicate common ancestry with globins., LaCount MW, Zhang E, Chen YP, Han K, Whitton MM, Lincoln DE, Woodin SA, Lebioda L, J Biol Chem. 2000 Jun 23;275(25):18712-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10751397 10751397]
 [[Category: Amphitrite ornata]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Chen, Y P.]]
+[[Category: Chen YP]]
-[[Category: Han, K.]]
+[[Category: Han K]]
-[[Category: LaCount, M W.]]
+[[Category: LaCount MW]]
-[[Category: Lebioda, L.]]
+[[Category: Lebioda L]]
-[[Category: Lincoln, D E.]]
+[[Category: Lincoln DE]]
-[[Category: Whitton, M M.]]
+[[Category: Whitton MM]]
-[[Category: Woodin, S A.]]
+[[Category: Woodin SA]]
-[[Category: Zhang, E.]]
+[[Category: Zhang E]]
-[[Category: Globin]]
-[[Category: Peroxidase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 02:07:04 2008''