1eoc: Difference between revisions

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-{{Seed}}
-[[Image:1eoc.png|left|200px]]
-<!--
+==CRYSTAL STRUCTURE OF ACINETOBACTER SP. ADP1 PROTOCATECHUATE 3,4-DIOXYGENASE IN COMPLEX WITH 4-NITROCATECHOL==
-The line below this paragraph, containing "STRUCTURE_1eoc", creates the "Structure Box" on the page.
+<StructureSection load='1eoc' size='340' side='right'caption='[[1eoc]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1eoc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baylyi_ADP1 Acinetobacter baylyi ADP1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EOC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EOC FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4NC:4-NITROCATECHOL'>4NC</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-{{STRUCTURE_1eoc|  PDB=1eoc  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1eoc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eoc OCA], [https://pdbe.org/1eoc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1eoc RCSB], [https://www.ebi.ac.uk/pdbsum/1eoc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1eoc ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/PCXA_ACIAD PCXA_ACIAD] Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eo/1eoc_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1eoc ConSurf].
+<div style="clear:both"></div>
-===CRYSTAL STRUCTURE OF ACINETOBACTER SP. ADP1 PROTOCATECHUATE 3,4-DIOXYGENASE IN COMPLEX WITH 4-NITROCATECHOL===
+==See Also==
+*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_10891075}}, adds the Publication Abstract to the page
+[[Category: Acinetobacter baylyi ADP1]]
-(as it appears on PubMed at http://www.pubmed.gov), where 10891075 is the PubMed ID number.
+[[Category: Large Structures]]
--->
+[[Category: D'Argenio DA]]
-{{ABSTRACT_PUBMED_10891075}}
+[[Category: Ohlendorf DH]]
+[[Category: Ornston LN]]
-==About this Structure==
+[[Category: Vetting MW]]
-EOC is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Acinetobacter_sp. Acinetobacter sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EOC OCA].
-==Reference==
-Structure of Acinetobacter strain ADP1 protocatechuate 3, 4-dioxygenase at 2.2 A resolution: implications for the mechanism of an intradiol dioxygenase., Vetting MW, D'Argenio DA, Ornston LN, Ohlendorf DH, Biochemistry. 2000 Jul 11;39(27):7943-55. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10891075 10891075]
-[[Category: Acinetobacter sp.]]
-[[Category: Protein complex]]
-[[Category: Protocatechuate 3,4-dioxygenase]]
-[[Category: Argenio, D A.D.]]
-[[Category: Ohlendorf, D H.]]
-[[Category: Ornston, L N.]]
-[[Category: Vetting, M W.]]
-[[Category: Beta-sandwich]]
-[[Category: Biodegradation]]
-[[Category: Dioxygenase]]
-[[Category: Mixed alpha/beta structure]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 01:17:19 2008''