1ek8: Difference between revisions

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-{{Seed}}
-[[Image:1ek8.png|left|200px]]
-<!--
+==CRYSTAL STRUCTURE OF THE RIBOSOME RECYCLING FACTOR (RRF) FROM ESCHERICHIA COLI==
-The line below this paragraph, containing "STRUCTURE_1ek8", creates the "Structure Box" on the page.
+<StructureSection load='1ek8' size='340' side='right'caption='[[1ek8]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1ek8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EK8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EK8 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DEM:DECYLOXY-METHANOL'>DEM</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene></td></tr>
-{{STRUCTURE_1ek8|  PDB=1ek8  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ek8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ek8 OCA], [https://pdbe.org/1ek8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ek8 RCSB], [https://www.ebi.ac.uk/pdbsum/1ek8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ek8 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/RRF_ECOLI RRF_ECOLI] Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.[HAMAP-Rule:MF_00040]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ek/1ek8_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ek8 ConSurf].
+<div style="clear:both"></div>
-===CRYSTAL STRUCTURE OF THE RIBOSOME RECYCLING FACTOR (RRF) FROM ESCHERICHIA COLI===
+==See Also==
+*[[Ribosome recycling factor|Ribosome recycling factor]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_10811627}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 10811627 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_10811627}}
-==About this Structure==
-EK8 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EK8 OCA].
-==Reference==
-<ref group="xtra">PMID:10811627</ref><references group="xtra"/>
 [[Category: Escherichia coli]]
-[[Category: Kim, K K.]]
+[[Category: Large Structures]]
-[[Category: Min, K.]]
+[[Category: Kim KK]]
-[[Category: Suh, S W.]]
+[[Category: Min K]]
-[[Category: Coiled coil]]
+[[Category: Suh SW]]
-[[Category: Ribosome]]
-[[Category: T-rna mimicry]]
-[[Category: Translation factor]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 15:02:45 2009''