1ei7: Difference between revisions
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==TMV COAT PROTEIN REFINED FROM THE 4-LAYER AGGREGATE== | |||
<StructureSection load='1ei7' size='340' side='right'caption='[[1ei7]], [[Resolution|resolution]] 2.45Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[1ei7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Tobacco_mosaic_virus Tobacco mosaic virus]. The January 2009 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Tobacco Mosaic Virus'' by David Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2009_1 10.2210/rcsb_pdb/mom_2009_1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EI7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EI7 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45Å</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ei7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ei7 OCA], [https://pdbe.org/1ei7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ei7 RCSB], [https://www.ebi.ac.uk/pdbsum/1ei7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ei7 ProSAT]</span></td></tr> | |||
== | </table> | ||
[[1ei7]] is a 2 chain structure with sequence from [ | == Function == | ||
[https://www.uniprot.org/uniprot/CAPSD_TMV CAPSD_TMV] Capsid protein self-assembles to form rod-shaped virions about 18 nm in diameter with a central canal enclosing the viral genomic RNA. | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ei/1ei7_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ei7 ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | ==See Also== | ||
*[[Virus coat | *[[Tobacco Mosaic Virus|Tobacco Mosaic Virus]] | ||
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]] | |||
__TOC__ | |||
< | </StructureSection> | ||
[[Category: Large Structures]] | |||
[[Category: RCSB PDB Molecule of the Month]] | [[Category: RCSB PDB Molecule of the Month]] | ||
[[Category: Tobacco Mosaic Virus]] | [[Category: Tobacco Mosaic Virus]] | ||
[[Category: Tobacco mosaic virus]] | [[Category: Tobacco mosaic virus]] | ||
[[Category: Bhyravbhatla | [[Category: Bhyravbhatla B]] | ||
[[Category: Caspar | [[Category: Caspar DL]] | ||
[[Category: Watowich | [[Category: Watowich SJ]] | ||
Latest revision as of 10:03, 7 February 2024
TMV COAT PROTEIN REFINED FROM THE 4-LAYER AGGREGATETMV COAT PROTEIN REFINED FROM THE 4-LAYER AGGREGATE
Structural highlights
FunctionCAPSD_TMV Capsid protein self-assembles to form rod-shaped virions about 18 nm in diameter with a central canal enclosing the viral genomic RNA. Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. See Also |
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