1ei3: Difference between revisions

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-{{Seed}}
-[[Image:1ei3.png|left|200px]]
-<!--
+==CRYSTAL STRUCTURE OF NATIVE CHICKEN FIBRINOGEN==
-The line below this paragraph, containing "STRUCTURE_1ei3", creates the "Structure Box" on the page.
+<StructureSection load='1ei3' size='340' side='right'caption='[[1ei3]], [[Resolution|resolution]] 5.50&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1ei3]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EI3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EI3 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 5.5&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ei3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ei3 OCA], [https://pdbe.org/1ei3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ei3 RCSB], [https://www.ebi.ac.uk/pdbsum/1ei3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ei3 ProSAT]</span></td></tr>
-{{STRUCTURE_1ei3|  PDB=1ei3  |  SCENE=  }}
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/FIBA_CHICK FIBA_CHICK] Fibrinogen has a double function: yielding monomers that polymerize into fibrin and acting as a cofactor in platelet aggregation.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ei/1ei3_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ei3 ConSurf].
+<div style="clear:both"></div>
-===CRYSTAL STRUCTURE OF NATIVE CHICKEN FIBRINOGEN===
+==See Also==
+*[[Fibrinogen|Fibrinogen]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_10737772}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 10737772 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_10737772}}
-==About this Structure==
-EI3 is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EI3 OCA].
-==Reference==
-Crystal structure of native chicken fibrinogen at 5.5-A resolution., Yang Z, Mochalkin I, Veerapandian L, Riley M, Doolittle RF, Proc Natl Acad Sci U S A. 2000 Apr 11;97(8):3907-12. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10737772 10737772]
 [[Category: Gallus gallus]]
-[[Category: Protein complex]]
+[[Category: Large Structures]]
-[[Category: Doolittle, R F.]]
+[[Category: Doolittle RF]]
-[[Category: Mochalkin, I.]]
+[[Category: Mochalkin I]]
-[[Category: Riley, M.]]
+[[Category: Riley M]]
-[[Category: Veerapandian, L.]]
+[[Category: Veerapandian L]]
-[[Category: Yang, Z.]]
+[[Category: Yang Z]]
-[[Category: Coiled coil]]
-[[Category: Disulfide ring]]
-[[Category: Fibrin forming entity]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 00:43:44 2008''