1egh: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-{{Seed}}
-[[Image:1egh.png|left|200px]]
-<!--
+==STRUCTURE OF METHYLGLYOXAL SYNTHASE COMPLEXED WITH THE COMPETITIVE INHIBITOR 2-PHOSPHOGLYCOLATE==
-The line below this paragraph, containing "STRUCTURE_1egh", creates the "Structure Box" on the page.
+<StructureSection load='1egh' size='340' side='right'caption='[[1egh]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1egh]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EGH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EGH FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PGA:2-PHOSPHOGLYCOLIC+ACID'>PGA</scene></td></tr>
-{{STRUCTURE_1egh|  PDB=1egh  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1egh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1egh OCA], [https://pdbe.org/1egh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1egh RCSB], [https://www.ebi.ac.uk/pdbsum/1egh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1egh ProSAT]</span></td></tr>
+</table>
-===STRUCTURE OF METHYLGLYOXAL SYNTHASE COMPLEXED WITH THE COMPETITIVE INHIBITOR 2-PHOSPHOGLYCOLATE===
+== Function ==
+[https://www.uniprot.org/uniprot/MGSA_ECOLI MGSA_ECOLI]
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_10715115}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 10715115 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eg/1egh_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_10715115}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-EGH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EGH OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1egh ConSurf].
+<div style="clear:both"></div>
-==Reference==
+__TOC__
-Mirroring perfection: the structure of methylglyoxal synthase complexed with the competitive inhibitor 2-phosphoglycolate., Saadat D, Harrison DH, Biochemistry. 2000 Mar 21;39(11):2950-60. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10715115 10715115]
+</StructureSection>
 [[Category: Escherichia coli]]
-[[Category: Methylglyoxal synthase]]
+[[Category: Large Structures]]
-[[Category: Single protein]]
+[[Category: Harrison DHT]]
-[[Category: Harrison, D H.T.]]
+[[Category: Saadat D]]
-[[Category: Saadat, D.]]
-[[Category: Beta/alpha protein]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 00:39:46 2008''