1ecx: Difference between revisions

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-{{Seed}}
-[[Image:1ecx.png|left|200px]]
-<!--
+==NIFS-LIKE PROTEIN==
-The line below this paragraph, containing "STRUCTURE_1ecx", creates the "Structure Box" on the page.
+<StructureSection load='1ecx' size='340' side='right'caption='[[1ecx]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1ecx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ECX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ECX FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYS:CYSTEINE'>CYS</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
-{{STRUCTURE_1ecx|  PDB=1ecx  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ecx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ecx OCA], [https://pdbe.org/1ecx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ecx RCSB], [https://www.ebi.ac.uk/pdbsum/1ecx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ecx ProSAT]</span></td></tr>
+</table>
-===NIFS-LIKE PROTEIN===
+== Function ==
+[https://www.uniprot.org/uniprot/Q9X218_THEMA Q9X218_THEMA]
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_10715213}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 10715213 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ec/1ecx_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_10715213}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-ECX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ECX OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ecx ConSurf].
+<div style="clear:both"></div>
-==Reference==
+__TOC__
-Crystal structure of a NifS-like protein from Thermotoga maritima: implications for iron sulphur cluster assembly., Kaiser JT, Clausen T, Bourenkow GP, Bartunik HD, Steinbacher S, Huber R, J Mol Biol. 2000 Mar 24;297(2):451-64. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10715213 10715213]
+</StructureSection>
-[[Category: Single protein]]
+[[Category: Large Structures]]
 [[Category: Thermotoga maritima]]
-[[Category: Bartunik, H D.]]
+[[Category: Bartunik H-D]]
-[[Category: Bourenkow, G P.]]
+[[Category: Bourenkow GP]]
-[[Category: Clausen, T C.]]
+[[Category: Clausen TC]]
-[[Category: Huber, R.]]
+[[Category: Huber R]]
-[[Category: Kaiser, J T.]]
+[[Category: Kaiser JT]]
-[[Category: Steinbacher, S.]]
+[[Category: Steinbacher S]]
-[[Category: C-s beta lyase]]
-[[Category: Iron-sulfur-cluster synthesis]]
-[[Category: Plp-dependent enzyme]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 00:30:33 2008''