1dxi: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-{{Seed}}
-[[Image:1dxi.png|left|200px]]
-<!--
+==STRUCTURE DETERMINATION OF GLUCOSE ISOMERASE FROM STREPTOMYCES MURINUS AT 2.6 ANGSTROMS RESOLUTION==
-The line below this paragraph, containing "STRUCTURE_1dxi", creates the "Structure Box" on the page.
+<StructureSection load='1dxi' size='340' side='right'caption='[[1dxi]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1dxi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_murinus Streptomyces murinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DXI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DXI FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-{{STRUCTURE_1dxi|  PDB=1dxi  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dxi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dxi OCA], [https://pdbe.org/1dxi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dxi RCSB], [https://www.ebi.ac.uk/pdbsum/1dxi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dxi ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/XYLA_STRMR XYLA_STRMR] Involved in D-xylose catabolism.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dx/1dxi_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dxi ConSurf].
+<div style="clear:both"></div>
-===STRUCTURE DETERMINATION OF GLUCOSE ISOMERASE FROM STREPTOMYCES MURINUS AT 2.6 ANGSTROMS RESOLUTION===
+==See Also==
+*[[D-xylose isomerase 3D structures|D-xylose isomerase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_15299450}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 15299450 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_15299450}}
-==About this Structure==
-DXI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptomyces_murinus Streptomyces murinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DXI OCA].
-==Reference==
-Structure determination of glucose isomerase from Streptomyces murinus at 2.6 A resolution., Rasmussen H, la Cour T, Nyborg J, Schulein M, Acta Crystallogr D Biol Crystallogr. 1994 Mar 1;50(Pt 2):124-31. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15299450 15299450]
-[[Category: Single protein]]
 [[Category: Streptomyces murinus]]
-[[Category: Xylose isomerase]]
+[[Category: La Cour T]]
-[[Category: Cour, T La.]]
+[[Category: Nyborg J]]
-[[Category: Nyborg, J.]]
+[[Category: Rasmussen H]]
-[[Category: Rasmussen, H.]]
+[[Category: Schulein M]]
-[[Category: Schulein, M.]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 23:46:00 2008''