1duk: Difference between revisions

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[[Image:1duk.png|left|200px]]


{{STRUCTURE_1duk|  PDB=1duk  |  SCENE=  }}
==WILD-TYPE RECOMBINANT SPERM WHALE METAQUOMYOGLOBIN==
 
<StructureSection load='1duk' size='340' side='right'caption='[[1duk]], [[Resolution|resolution]] 2.13&Aring;' scene=''>
===WILD-TYPE RECOMBINANT SPERM WHALE METAQUOMYOGLOBIN===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1duk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DUK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DUK FirstGlance]. <br>
{{ABSTRACT_PUBMED_10813811}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.13&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1duk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1duk OCA], [https://pdbe.org/1duk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1duk RCSB], [https://www.ebi.ac.uk/pdbsum/1duk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1duk ProSAT]</span></td></tr>
[[1duk]] is a 1 chain structure of [[Hemoglobin]] and [[Myoglobin]] with sequence from [http://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DUK OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/MYG_PHYMC MYG_PHYMC] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/du/1duk_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1duk ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Hemoglobin|Hemoglobin]]
*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
*[[Myoglobin|Myoglobin]]
*[[Myoglobin 3D structures|Myoglobin 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:010813811</ref><references group="xtra"/>
[[Category: Large Structures]]
[[Category: Physeter catodon]]
[[Category: Physeter catodon]]
[[Category: Barrick, D.]]
[[Category: Barrick D]]
[[Category: Dahlquist, F W.]]
[[Category: Dahlquist FW]]
[[Category: Heme protein]]
[[Category: Myoglobin]]
[[Category: Oxygen storage-transport complex]]
[[Category: Oxygen-storage protein]]

Latest revision as of 09:59, 7 February 2024

WILD-TYPE RECOMBINANT SPERM WHALE METAQUOMYOGLOBINWILD-TYPE RECOMBINANT SPERM WHALE METAQUOMYOGLOBIN

Structural highlights

1duk is a 1 chain structure with sequence from Physeter catodon. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.13Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

MYG_PHYMC Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1duk, resolution 2.13Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA