1dqv: Difference between revisions

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[[Image:1dqv.png|left|200px]]


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==CRYSTAL STRUCTURE OF SYNAPTOTAGMIN III C2A/C2B==
The line below this paragraph, containing "STRUCTURE_1dqv", creates the "Structure Box" on the page.
<StructureSection load='1dqv' size='340' side='right'caption='[[1dqv]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1dqv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_rattus Rattus rattus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DQV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DQV FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_1dqv| PDB=1dqv |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dqv OCA], [https://pdbe.org/1dqv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dqv RCSB], [https://www.ebi.ac.uk/pdbsum/1dqv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dqv ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/SYT3_RAT SYT3_RAT] May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dq/1dqv_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dqv ConSurf].
<div style="clear:both"></div>


===CRYSTAL STRUCTURE OF SYNAPTOTAGMIN III C2A/C2B===
==See Also==
 
*[[Synaptotagmin 3D structures|Synaptotagmin 3D structures]]
 
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[[Category: Large Structures]]
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{{ABSTRACT_PUBMED_10545502}}
 
==About this Structure==
1DQV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rattus_rattus Rattus rattus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DQV OCA].
 
==Reference==
Crystal structure of the cytosolic C2A-C2B domains of synaptotagmin III. Implications for Ca(+2)-independent snare complex interaction., Sutton RB, Ernst JA, Brunger AT, J Cell Biol. 1999 Nov 1;147(3):589-98. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10545502 10545502]
[[Category: Rattus rattus]]
[[Category: Rattus rattus]]
[[Category: Single protein]]
[[Category: Brunger AT]]
[[Category: Brunger, A T.]]
[[Category: Ernst JA]]
[[Category: Ernst, J A.]]
[[Category: Sutton RB]]
[[Category: Sutton, R B.]]
[[Category: Beta sandwich]]
[[Category: C2 domain]]
[[Category: Calcium ion]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 23:29:08 2008''

Latest revision as of 09:58, 7 February 2024

CRYSTAL STRUCTURE OF SYNAPTOTAGMIN III C2A/C2BCRYSTAL STRUCTURE OF SYNAPTOTAGMIN III C2A/C2B

Structural highlights

1dqv is a 1 chain structure with sequence from Rattus rattus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

SYT3_RAT May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1dqv, resolution 3.20Å

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