1dgr: Difference between revisions

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-[[Image:1dgr.png|left|200px]]
-{{STRUCTURE_1dgr|  PDB=1dgr  |  SCENE=  }}
+==Refined crystal structure of canavalin from jack bean==
+<StructureSection load='1dgr' size='340' side='right'caption='[[1dgr]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-===Refined crystal structure of canavalin from jack bean===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1dgr]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Canavalia_ensiformis Canavalia ensiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DGR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DGR FirstGlance]. <br>
-{{ABSTRACT_PUBMED_11375502}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dgr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dgr OCA], [https://pdbe.org/1dgr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dgr RCSB], [https://www.ebi.ac.uk/pdbsum/1dgr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dgr ProSAT]</span></td></tr>
-[[1dgr]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/Canavalia_ensiformis Canavalia ensiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DGR OCA].
+</table>
+== Function ==
-==Reference==
+[https://www.uniprot.org/uniprot/CANA_CANEN CANA_CANEN] Seed storage protein.
-<ref group="xtra">PMID:011375502</ref><references group="xtra"/>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dg/1dgr_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dgr ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
 [[Category: Canavalia ensiformis]]
-[[Category: Ko, T P.]]
+[[Category: Large Structures]]
-[[Category: McPherson, A.]]
+[[Category: Ko T-P]]
-[[Category: Duplicated domains beta barrel helical loop]]
+[[Category: McPherson A]]
-[[Category: Plant protein]]