1d5y: Difference between revisions

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-[[Image:1d5y.png|left|200px]]
-{{STRUCTURE_1d5y|  PDB=1d5y  |  SCENE=  }}
+==CRYSTAL STRUCTURE OF THE E. COLI ROB TRANSCRIPTION FACTOR IN COMPLEX WITH DNA==
+<StructureSection load='1d5y' size='340' side='right'caption='[[1d5y]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-===CRYSTAL STRUCTURE OF THE E. COLI ROB TRANSCRIPTION FACTOR IN COMPLEX WITH DNA===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1d5y]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D5Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D5Y FirstGlance]. <br>
-{{ABSTRACT_PUBMED_10802742}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d5y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d5y OCA], [https://pdbe.org/1d5y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d5y RCSB], [https://www.ebi.ac.uk/pdbsum/1d5y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d5y ProSAT]</span></td></tr>
-==About this Structure==
+</table>
-[[1d5y]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D5Y OCA].
+== Function ==
+[https://www.uniprot.org/uniprot/ROB_ECOLI ROB_ECOLI] Binds to the right arm of the replication origin oriC of the chromosome. Rob binding may influence the formation of the nucleoprotein structure, required for oriC function in the initiation of replication.
-==Reference==
+== Evolutionary Conservation ==
-<ref group="xtra">PMID:010802742</ref><references group="xtra"/>
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d5/1d5y_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1d5y ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
 [[Category: Escherichia coli]]
-[[Category: Bennik, M H.J.]]
+[[Category: Large Structures]]
-[[Category: Demple, B.]]
+[[Category: Bennik MHJ]]
-[[Category: Ellenberger, T.]]
+[[Category: Demple B]]
-[[Category: Kwon, H J.]]
+[[Category: Ellenberger T]]
-[[Category: Dna]]
+[[Category: Kwon HJ]]
-[[Category: Protein-dna complex]]
-[[Category: Rob transcription factor]]
-[[Category: Transcription-dna complex]]