1d1c: Difference between revisions

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-[[Image:1d1c.png|left|200px]]
-<!--
+==DICTYOSTELIUM MYOSIN S1DC (MOTOR DOMAIN FRAGMENT) COMPLEXED WITH N-METHYL-O-NITROPHENYL AMINOETHYLDIPHOSPHATE BERYLLIUM TRIFLUORIDE.==
-The line below this paragraph, containing "STRUCTURE_1d1c", creates the "Structure Box" on the page.
+<StructureSection load='1d1c' size='340' side='right'caption='[[1d1c]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1d1c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Dictyostelium_discoideum Dictyostelium discoideum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D1C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D1C FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NMQ:N-METHYL+O-NITROPHENYL+AMINOETHYLDIPHOSPHATE+BERYLLIUM+TRIFLUORIDE'>NMQ</scene></td></tr>
-{{STRUCTURE_1d1c|  PDB=1d1c  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d1c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d1c OCA], [https://pdbe.org/1d1c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d1c RCSB], [https://www.ebi.ac.uk/pdbsum/1d1c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d1c ProSAT]</span></td></tr>
+</table>
-===DICTYOSTELIUM MYOSIN S1DC (MOTOR DOMAIN FRAGMENT) COMPLEXED WITH N-METHYL-O-NITROPHENYL AMINOETHYLDIPHOSPHATE BERYLLIUM TRIFLUORIDE.===
+== Function ==
+[https://www.uniprot.org/uniprot/MYS2_DICDI MYS2_DICDI] Myosin is a protein that binds to actin and has ATPase activity that is activated by actin.
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_10617631}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 10617631 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d1/1d1c_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_10617631}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-[[1d1c]] is a 1 chain structure of [[Myosin]] with sequence from [http://en.wikipedia.org/wiki/Dictyostelium_discoideum Dictyostelium discoideum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D1C OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1d1c ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Myosin]]
+*[[Myosin 3D Structures|Myosin 3D Structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:10617631</ref><references group="xtra"/>
 [[Category: Dictyostelium discoideum]]
-[[Category: Bauer, C B.]]
+[[Category: Large Structures]]
-[[Category: Gulick, A M.]]
+[[Category: Bauer CB]]
-[[Category: Pate, E.]]
+[[Category: Gulick AM]]
-[[Category: Rayment, I.]]
+[[Category: Pate E]]
-[[Category: Thoden, J B.]]
+[[Category: Rayment I]]
-[[Category: Yount, R G.]]
+[[Category: Thoden JB]]
-[[Category: Actin-binding]]
+[[Category: Yount RG]]
-[[Category: Contractile protein]]
-[[Category: Motility]]
-[[Category: Motor domain]]
-[[Category: Myosin]]
-[[Category: Nanolog]]