1cv3: Difference between revisions

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-[[Image:1cv3.png|left|200px]]
-{{STRUCTURE_1cv3|  PDB=1cv3  |  SCENE=  }}
+==T4 LYSOZYME MUTANT L121M==
+<StructureSection load='1cv3' size='340' side='right'caption='[[1cv3]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-===T4 LYSOZYME MUTANT L121M===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1cv3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CV3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CV3 FirstGlance]. <br>
-{{ABSTRACT_PUBMED_10545167}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HED:2-HYDROXYETHYL+DISULFIDE'>HED</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1cv3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cv3 OCA], [https://pdbe.org/1cv3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1cv3 RCSB], [https://www.ebi.ac.uk/pdbsum/1cv3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1cv3 ProSAT]</span></td></tr>
-[[1cv3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CV3 OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/ENLYS_BPT4 ENLYS_BPT4] Endolysin with lysozyme activity that degrades host peptidoglycans and participates with the holin and spanin proteins in the sequential events which lead to the programmed host cell lysis releasing the mature viral particles. Once the holin has permeabilized the host cell membrane, the endolysin can reach the periplasm and break down the peptidoglycan layer.<ref>PMID:22389108</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cv/1cv3_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1cv3 ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Hen Egg-White (HEW) Lysozyme|Hen Egg-White (HEW) Lysozyme]]
+*[[Lysozyme 3D structures|Lysozyme 3D structures]]
+== References ==
-==Reference==
+<references/>
-<ref group="xtra">PMID:010545167</ref><references group="xtra"/>
+__TOC__
-[[Category: Enterobacteria phage t4]]
+</StructureSection>
-[[Category: Lysozyme]]
+[[Category: Escherichia virus T4]]
-[[Category: Baase, W A.]]
+[[Category: Large Structures]]
-[[Category: Gassner, N C.]]
+[[Category: Baase WA]]
-[[Category: Lindstrom, J.]]
+[[Category: Gassner NC]]
-[[Category: Lu, J.]]
+[[Category: Lindstrom J]]
-[[Category: Matthews, B W.]]
+[[Category: Lu J]]
-[[Category: Hydrolase]]
+[[Category: Matthews BW]]
-[[Category: Methionine core mutant]]
-[[Category: Protein engineering]]
-[[Category: Protein folding]]
-[[Category: T4 lysozyme]]