1bou: Difference between revisions

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-{{Seed}}
-[[Image:1bou.png|left|200px]]
-<!--
+==THREE-DIMENSIONAL STRUCTURE OF LIGAB==
-The line below this paragraph, containing "STRUCTURE_1bou", creates the "Structure Box" on the page.
+<StructureSection load='1bou' size='340' side='right'caption='[[1bou]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1bou]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Sphingomonas_paucimobilis Sphingomonas paucimobilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BOU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BOU FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-{{STRUCTURE_1bou|  PDB=1bou  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bou FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bou OCA], [https://pdbe.org/1bou PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bou RCSB], [https://www.ebi.ac.uk/pdbsum/1bou PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bou ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/PCYA_SPHSK PCYA_SPHSK]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bo/1bou_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bou ConSurf].
+<div style="clear:both"></div>
-===THREE-DIMENSIONAL STRUCTURE OF LIGAB===
+==See Also==
+*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_10467151}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 10467151 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_10467151}}
-==About this Structure==
-BOU is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Sphingomonas_paucimobilis Sphingomonas paucimobilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BOU OCA].
-==Reference==
-Crystal structure of an aromatic ring opening dioxygenase LigAB, a protocatechuate 4,5-dioxygenase, under aerobic conditions., Sugimoto K, Senda T, Aoshima H, Masai E, Fukuda M, Mitsui Y, Structure. 1999 Aug 15;7(8):953-65. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10467151 10467151]
-[[Category: Protein complex]]
-[[Category: Protocatechuate 4,5-dioxygenase]]
 [[Category: Sphingomonas paucimobilis]]
-[[Category: Fukuda, M.]]
+[[Category: Fukuda M]]
-[[Category: Mitsui, Y.]]
+[[Category: Mitsui Y]]
-[[Category: Senda, T.]]
+[[Category: Senda T]]
-[[Category: Sugimoto, K.]]
+[[Category: Sugimoto K]]
-[[Category: Extradiol type dioxygenase]]
-[[Category: Oxidoreductase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 19:28:24 2008''