1bd4: Difference between revisions

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-[[Image:1bd4.png|left|200px]]
-{{STRUCTURE_1bd4|  PDB=1bd4  |  SCENE=  }}
+==UPRT-URACIL COMPLEX==
+<StructureSection load='1bd4' size='340' side='right'caption='[[1bd4]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1bd4]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Toxoplasma_gondii Toxoplasma gondii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BD4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BD4 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=URA:URACIL'>URA</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bd4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bd4 OCA], [https://pdbe.org/1bd4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bd4 RCSB], [https://www.ebi.ac.uk/pdbsum/1bd4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bd4 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/UPP_TOXGO UPP_TOXGO] Catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate.<ref>PMID:9247925</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bd/1bd4_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bd4 ConSurf].
+<div style="clear:both"></div>
-===UPRT-URACIL COMPLEX===
+==See Also==
+*[[Phosphoribosyltransferase 3D structures|Phosphoribosyltransferase 3D structures]]
-{{ABSTRACT_PUBMED_9628859}}
+== References ==
+<references/>
-==About this Structure==
+__TOC__
-[[1bd4]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Toxoplasma_gondii Toxoplasma gondii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BD4 OCA].
+</StructureSection>
+[[Category: Large Structures]]
-==Reference==
-<ref group="xtra">PMID:009628859</ref><references group="xtra"/>
 [[Category: Toxoplasma gondii]]
-[[Category: Uracil phosphoribosyltransferase]]
+[[Category: Brennan RG]]
-[[Category: Brennan, R G.]]
+[[Category: Carter D]]
-[[Category: Carter, D.]]
+[[Category: Roos D]]
-[[Category: Roos, D.]]
+[[Category: Schumacher MA]]
-[[Category: Schumacher, M A.]]
+[[Category: Scott D]]
-[[Category: Scott, D.]]
+[[Category: Ullman B]]
-[[Category: Ullman, B.]]
-[[Category: Complex]]
-[[Category: Glycosyltransferase]]
-[[Category: Transferase]]
-[[Category: Uprt]]
-[[Category: Uracil]]