1atg: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-{{Seed}}
-[[Image:1atg.png|left|200px]]
-<!--
+==AZOTOBACTER VINELANDII PERIPLASMIC MOLYBDATE-BINDING PROTEIN==
-The line below this paragraph, containing "STRUCTURE_1atg", creates the "Structure Box" on the page.
+<StructureSection load='1atg' size='340' side='right'caption='[[1atg]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1atg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ATG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ATG FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=WO4:TUNGSTATE(VI)ION'>WO4</scene></td></tr>
-{{STRUCTURE_1atg|  PDB=1atg  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1atg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1atg OCA], [https://pdbe.org/1atg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1atg RCSB], [https://www.ebi.ac.uk/pdbsum/1atg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1atg ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q7SIH2_AZOVI Q7SIH2_AZOVI]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/at/1atg_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1atg ConSurf].
+<div style="clear:both"></div>
-===AZOTOBACTER VINELANDII PERIPLASMIC MOLYBDATE-BINDING PROTEIN===
+==See Also==
+*[[ABC transporter 3D structures|ABC transporter 3D structures]]
+*[[ModG|ModG]]
-<!--
+__TOC__
-The line below this paragraph, {{ABSTRACT_PUBMED_9862806}}, adds the Publication Abstract to the page
+</StructureSection>
-(as it appears on PubMed at http://www.pubmed.gov), where 9862806 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_9862806}}
-==About this Structure==
-ATG is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ATG OCA].
-==Reference==
-<ref group="xtra">PMID:9862806</ref><references group="xtra"/>
 [[Category: Azotobacter vinelandii]]
-[[Category: Lawson, D M.]]
+[[Category: Large Structures]]
-[[Category: Mitchenall, L A.]]
+[[Category: Lawson DM]]
-[[Category: Pau, R N.]]
+[[Category: Mitchenall LA]]
-[[Category: Williams, C E.M.]]
+[[Category: Pau RN]]
-[[Category: Abc transporter]]
+[[Category: Williams CEM]]
-[[Category: Binding protein]]
-[[Category: Molybdate]]
-[[Category: Periplasm]]
-[[Category: Tungstate]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 22:06:06 2009''