1aku: Difference between revisions

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{{Seed}}
[[Image:1aku.png|left|200px]]


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==D95A HYDROQUINONE FLAVODOXIN MUTANT FROM D. VULGARIS==
The line below this paragraph, containing "STRUCTURE_1aku", creates the "Structure Box" on the page.
<StructureSection load='1aku' size='340' side='right'caption='[[1aku]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1aku]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._Hildenborough Desulfovibrio vulgaris str. Hildenborough]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AKU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AKU FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_1aku|  PDB=1aku |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1aku FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1aku OCA], [https://pdbe.org/1aku PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1aku RCSB], [https://www.ebi.ac.uk/pdbsum/1aku PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1aku ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/FLAV_DESVH FLAV_DESVH] Low-potential electron donor to a number of redox enzymes.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ak/1aku_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1aku ConSurf].
<div style="clear:both"></div>


===D95A HYDROQUINONE FLAVODOXIN MUTANT FROM D. VULGARIS===
==See Also==
 
*[[Flavodoxin 3D structures|Flavodoxin 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_12206666}}, adds the Publication Abstract to the page
[[Category: Desulfovibrio vulgaris str. Hildenborough]]
(as it appears on PubMed at http://www.pubmed.gov), where 12206666 is the PubMed ID number.
[[Category: Large Structures]]
-->
[[Category: Higgins T]]
{{ABSTRACT_PUBMED_12206666}}
[[Category: Mccarthy A]]
 
[[Category: Walsh M]]
==About this Structure==
1AKU is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AKU OCA].
 
==Reference==
<ref group="xtra">PMID:12206666</ref><references group="xtra"/>
[[Category: Desulfovibrio vulgaris]]
[[Category: Higgins, T.]]
[[Category: Mccarthy, A.]]
[[Category: Walsh, M.]]
[[Category: Electron transfer]]
[[Category: Electron transport]]
[[Category: Flavodoxin]]
[[Category: Flavoprotein]]
[[Category: Fmn]]
[[Category: Mutant]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 12:43:43 2009''

Latest revision as of 09:31, 7 February 2024

D95A HYDROQUINONE FLAVODOXIN MUTANT FROM D. VULGARISD95A HYDROQUINONE FLAVODOXIN MUTANT FROM D. VULGARIS

Structural highlights

1aku is a 1 chain structure with sequence from Desulfovibrio vulgaris str. Hildenborough. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

FLAV_DESVH Low-potential electron donor to a number of redox enzymes.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1aku, resolution 1.90Å

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