196d: Difference between revisions

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[[Image:196d.jpg|left|200px]]


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==CRYSTAL STRUCTURE OF C-T-C-T-C-G-A-G-A-G: IMPLICATIONS FOR THE STRUCTURE OF THE HOLLIDAY JUNCTION==
The line below this paragraph, containing "STRUCTURE_196d", creates the "Structure Box" on the page.
<StructureSection load='196d' size='340' side='right'caption='[[196d]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[196d]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=196D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=196D FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
{{STRUCTURE_196d|  PDB=196d  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=196d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=196d OCA], [https://pdbe.org/196d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=196d RCSB], [https://www.ebi.ac.uk/pdbsum/196d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=196d ProSAT]</span></td></tr>
 
</table>
'''CRYSTAL STRUCTURE OF C-T-C-T-C-G-A-G-A-G: IMPLICATIONS FOR THE STRUCTURE OF THE HOLLIDAY JUNCTION'''
__TOC__
 
</StructureSection>
 
[[Category: Large Structures]]
==Overview==
[[Category: Dickerson RE]]
The structure of the B-DNA decamer of sequence C-T-C-T-C-G-A-G-A-G shows a crossed arrangement of helices in the C2 crystal lattice. This is the fourth example of a crossed arrangement of B-DNA oligomers in a crystal, and in spite of the fact that each of these four crystallizes in a different lattice, all have nearly identical structures at the crossing contact. This ubiquitous crossing arrangement may be used to generate a structure for the Holliday junction that is fully consistent with the available physical data.
[[Category: Goodsell DS]]
 
[[Category: Grzeskowiak K]]
==About this Structure==
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=196D OCA].  
 
==Reference==
Crystal structure of C-T-C-T-C-G-A-G-A-G. Implications for the structure of the Holliday junction., Goodsell DS, Grzeskowiak K, Dickerson RE, Biochemistry. 1995 Jan 24;34(3):1022-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/7827018 7827018]
[[Category: Dickerson, R E.]]
[[Category: Goodsell, D S.]]
[[Category: Grzeskowiak, K.]]
[[Category: B-dna]]
[[Category: Double helix]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May  2 09:35:40 2008''

Latest revision as of 09:26, 7 February 2024

CRYSTAL STRUCTURE OF C-T-C-T-C-G-A-G-A-G: IMPLICATIONS FOR THE STRUCTURE OF THE HOLLIDAY JUNCTIONCRYSTAL STRUCTURE OF C-T-C-T-C-G-A-G-A-G: IMPLICATIONS FOR THE STRUCTURE OF THE HOLLIDAY JUNCTION

Structural highlights

196d is a 2 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

196d, resolution 1.70Å

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