190d: Difference between revisions

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 ==Crystal structure of a four-stranded intercalated DNA: d(C4)==
-<StructureSection load='190d' size='340' side='right' caption='[[190d]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+<StructureSection load='190d' size='340' side='right'caption='[[190d]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[190d]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=190D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=190D FirstGlance]. <br>
+<table><tr><td colspan='2'>[[190d]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=190D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=190D FirstGlance]. <br>
-</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=190d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=190d OCA], [http://pdbe.org/190d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=190d RCSB], [http://www.ebi.ac.uk/pdbsum/190d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=190d ProSAT]</span></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=190d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=190d OCA], [https://pdbe.org/190d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=190d RCSB], [https://www.ebi.ac.uk/pdbsum/190d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=190d ProSAT]</span></td></tr>
 </table>
-<div style="background-color:#fffaf0;">
-== Publication Abstract from PubMed ==
-The crystal structure of d(C4) solved at 2.3-A resolution reveals a four-stranded molecule composed of two interdigitated or intercalated duplexes. The duplexes are held together by hemiprotonated cytosine-cytosine base pairs and are parallel stranded, but the two duplexes point in opposite directions. The molecule has a slow right-handed twist of 12.4 degrees between covalently linked cytosine base pairs, and the base stacking distance is 3.1 A. This is in general agreement with the NMR studies. A biological role for DNA in this conformation is suggested.
-Crystal structure of a four-stranded intercalated DNA: d(C4).,Chen L, Cai L, Zhang X, Rich A Biochemistry. 1994 Nov 22;33(46):13540-6. PMID:7947764<ref>PMID:7947764</ref>
-From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-</div>
-<div class="pdbe-citations 190d" style="background-color:#fffaf0;"></div>
-== References ==
-<references/>
 __TOC__
 </StructureSection>
-[[Category: Cai, L]]
+[[Category: Large Structures]]
-[[Category: Chen, L]]
+[[Category: Cai L]]
-[[Category: Rich, A]]
+[[Category: Chen L]]
-[[Category: Zhang, X]]
+[[Category: Rich A]]
-[[Category: Base intercalated]]
+[[Category: Zhang X]]
-[[Category: Dna]]
-[[Category: Mismatched]]
-[[Category: Parallel-stranded tetraplex]]
-[[Category: Quadruple helix]]
-[[Category: U-dna]]