2vlo: Difference between revisions

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-==K97A MUTANT OF E9 DNASE DOMAIN IN COMPLEX WITH IM9==
-<StructureSection load='2vlo' size='340' side='right' caption='[[2vlo]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+==K97A mutant of E9 DNase domain in complex with Im9==
+<StructureSection load='2vlo' size='340' side='right'caption='[[2vlo]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2vlo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VLO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VLO FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2vlo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VLO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VLO FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ivz|2ivz]], [[1v14|1v14]], [[1fsj|1fsj]], [[1v15|1v15]], [[1bxi|1bxi]], [[1imp|1imp]], [[1imq|1imq]], [[1v13|1v13]], [[1e0h|1e0h]], [[1emv|1emv]], [[1fr2|1fr2]], [[2vln|2vln]], [[2vlq|2vlq]], [[2vlp|2vlp]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vlo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vlo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2vlo RCSB], [http://www.ebi.ac.uk/pdbsum/2vlo PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vlo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vlo OCA], [https://pdbe.org/2vlo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vlo RCSB], [https://www.ebi.ac.uk/pdbsum/2vlo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vlo ProSAT]</span></td></tr>
-<table>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/IMM9_ECOLX IMM9_ECOLX] This protein is able to protect a cell, which harbors the plasmid ColE9 encoding colicin E9, against colicin E9, it binds specifically to the DNase-type colicin and inhibits its bactericidal activity.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vl/2vlo_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vl/2vlo_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vlo ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 25: / Line 28: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 2vlo" style="background-color:#fffaf0;"></div>
 ==See Also==
-*[[Colicin|Colicin]]
+*[[Colicin 3D structures|Colicin 3D structures]]
-*[[Colicin Immunity Protein|Colicin Immunity Protein]]
+*[[Colicin immunity protein 3D structures|Colicin immunity protein 3D structures]]
 == References ==
 <references/>
@@ Line 34: / Line 38: @@
 </StructureSection>
 [[Category: Escherichia coli]]
-[[Category: Baker, D.]]
+[[Category: Large Structures]]
-[[Category: Joachimiak, L A.]]
+[[Category: Baker D]]
-[[Category: Keeble, A H.]]
+[[Category: Joachimiak LA]]
-[[Category: Kirkpatrick, N.]]
+[[Category: Keeble AH]]
-[[Category: Kleanthous, C.]]
+[[Category: Kirkpatrick N]]
-[[Category: Mate, M J.]]
+[[Category: Kleanthous C]]
-[[Category: Meenan, N.]]
+[[Category: Mate MJ]]
-[[Category: Antibiotic]]
+[[Category: Meenan N]]
-[[Category: Antimicrobial]]
-[[Category: Bacteriocin]]
-[[Category: Bacteriocin immunity]]
-[[Category: Colicin]]
-[[Category: Endonuclease]]
-[[Category: Hth motif]]
-[[Category: Hydrolase]]
-[[Category: Metal-binding]]
-[[Category: Nuclease]]
-[[Category: Protein-binding]]
-[[Category: Protein-protein interaction]]