6ylm: Difference between revisions
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==mCherry== | |||
<StructureSection load='6ylm' size='340' side='right'caption='[[6ylm]], [[Resolution|resolution]] 1.60Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[6ylm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Discosoma_sp. Discosoma sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YLM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YLM FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NRQ:{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>NRQ</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ylm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ylm OCA], [https://pdbe.org/6ylm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ylm RCSB], [https://www.ebi.ac.uk/pdbsum/6ylm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ylm ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/D1MPT3_DISSP D1MPT3_DISSP] | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Fluorescent molecules are like antennas: The rate at which they absorb light depends on their orientation with respect to the incoming light wave, and the apparent intensity of their emission depends on their orientation with respect to the observer. However, the directions along which the most important fluorescent molecules in biology, fluorescent proteins (FPs), absorb and emit light are generally not known. Our optical and X-ray investigations of FP crystals have now allowed us to determine the molecular orientations of the excitation and emission transition dipole moments in the FPs mTurquoise2, eGFP, and mCherry, and the photoconvertible FP mEos4b. Our results will allow using FP directionality in studies of molecular and biological processes, but also in development of novel bioengineering and bioelectronics applications. | |||
Directionality of light absorption and emission in representative fluorescent proteins.,Myskova J, Rybakova O, Brynda J, Khoroshyy P, Bondar A, Lazar J Proc Natl Acad Sci U S A. 2020 Dec 3. pii: 2017379117. doi:, 10.1073/pnas.2017379117. PMID:33273123<ref>PMID:33273123</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
[[Category: | </div> | ||
[[Category: | <div class="pdbe-citations 6ylm" style="background-color:#fffaf0;"></div> | ||
[[Category: Lazar | |||
[[Category: | ==See Also== | ||
[[Category: | *[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]] | ||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Discosoma sp]] | |||
[[Category: Large Structures]] | |||
[[Category: Brynda J]] | |||
[[Category: Lazar J]] | |||
[[Category: Myskova J]] | |||
[[Category: Rybakova M]] | |||
Latest revision as of 16:29, 24 January 2024
mCherrymCherry
Structural highlights
FunctionPublication Abstract from PubMedFluorescent molecules are like antennas: The rate at which they absorb light depends on their orientation with respect to the incoming light wave, and the apparent intensity of their emission depends on their orientation with respect to the observer. However, the directions along which the most important fluorescent molecules in biology, fluorescent proteins (FPs), absorb and emit light are generally not known. Our optical and X-ray investigations of FP crystals have now allowed us to determine the molecular orientations of the excitation and emission transition dipole moments in the FPs mTurquoise2, eGFP, and mCherry, and the photoconvertible FP mEos4b. Our results will allow using FP directionality in studies of molecular and biological processes, but also in development of novel bioengineering and bioelectronics applications. Directionality of light absorption and emission in representative fluorescent proteins.,Myskova J, Rybakova O, Brynda J, Khoroshyy P, Bondar A, Lazar J Proc Natl Acad Sci U S A. 2020 Dec 3. pii: 2017379117. doi:, 10.1073/pnas.2017379117. PMID:33273123[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See AlsoReferences
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