6t8m: Difference between revisions

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OCA

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 <StructureSection load='6t8m' size='340' side='right'caption='[[6t8m]], [[Resolution|resolution]] 2.02&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[6t8m]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Dicdi Dicdi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6T8M OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6T8M FirstGlance]. <br>
+<table><tr><td colspan='2'>[[6t8m]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Dictyostelium_discoideum Dictyostelium discoideum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6T8M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6T8M FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=OGA:N-OXALYLGLYCINE'>OGA</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.02&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">phyA, p4h1, DDB_G0277759 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=44689 DICDI])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=OGA:N-OXALYLGLYCINE'>OGA</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6t8m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6t8m OCA], [http://pdbe.org/6t8m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6t8m RCSB], [http://www.ebi.ac.uk/pdbsum/6t8m PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6t8m ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6t8m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6t8m OCA], [https://pdbe.org/6t8m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6t8m RCSB], [https://www.ebi.ac.uk/pdbsum/6t8m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6t8m ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/P4HA_DICDI P4HA_DICDI]] Catalyzes the post-translational formation of 4-hydroxyproline. Probably hydroxylates skp1 on Pro-143.<ref>PMID:11358877</ref>
+[https://www.uniprot.org/uniprot/P4HA_DICDI P4HA_DICDI] Catalyzes the post-translational formation of 4-hydroxyproline. Probably hydroxylates skp1 on Pro-143.<ref>PMID:11358877</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
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 __TOC__
 </StructureSection>
-[[Category: Dicdi]]
+[[Category: Dictyostelium discoideum]]
 [[Category: Large Structures]]
-[[Category: Chowdhury, R]]
+[[Category: Chowdhury R]]
-[[Category: Clifton, I J]]
+[[Category: Clifton IJ]]
-[[Category: Liu, T]]
+[[Category: Liu T]]
-[[Category: McDonough, M A]]
+[[Category: McDonough MA]]
-[[Category: Schofield, C J]]
+[[Category: Schofield CJ]]
-[[Category: 2-oxoglutarate and iron dependent oxygenase]]
-[[Category: Oxidoreductase]]
-[[Category: Oxygen sensing]]
-[[Category: Prolyl hydroxylase]]