5df5: Difference between revisions

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'''Unreleased structure'''


The entry 5df5 is ON HOLD until Paper Publication
==The structure of oxidized rat cytochrome c (T28E) at 1.30 angstroms resolution.==
<StructureSection load='5df5' size='340' side='right'caption='[[5df5]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5df5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DF5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DF5 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.301&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FC6:HEXACYANOFERRATE(3-)'>FC6</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5df5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5df5 OCA], [https://pdbe.org/5df5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5df5 RCSB], [https://www.ebi.ac.uk/pdbsum/5df5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5df5 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CYC_RAT CYC_RAT] Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. Plays a role in apoptosis. Suppression of the anti-apoptotic members or activation of the pro-apoptotic members of the Bcl-2 family leads to altered mitochondrial membrane permeability resulting in release of cytochrome c into the cytosol. Binding of cytochrome c to Apaf-1 triggers the activation of caspase-9, which then accelerates apoptosis by activating other caspases (By similarity).


Authors: Edwards, B.F.P., Mahapatra, G., Vaishnav, A.A., Brunzelle, J.S., Huttemann, M.
==See Also==
 
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
Description:  
__TOC__
[[Category: Unreleased Structures]]
</StructureSection>
[[Category: Vaishnav, A.A]]
[[Category: Large Structures]]
[[Category: Mahapatra, G]]
[[Category: Rattus norvegicus]]
[[Category: Huttemann, M]]
[[Category: Brunzelle JS]]
[[Category: Edwards, B.F.P]]
[[Category: Edwards BFP]]
[[Category: Brunzelle, J.S]]
[[Category: Huttemann M]]
[[Category: Mahapatra G]]
[[Category: Vaishnav AA]]

Latest revision as of 14:26, 10 January 2024

The structure of oxidized rat cytochrome c (T28E) at 1.30 angstroms resolution.The structure of oxidized rat cytochrome c (T28E) at 1.30 angstroms resolution.

Structural highlights

5df5 is a 4 chain structure with sequence from Rattus norvegicus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.301Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CYC_RAT Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. Plays a role in apoptosis. Suppression of the anti-apoptotic members or activation of the pro-apoptotic members of the Bcl-2 family leads to altered mitochondrial membrane permeability resulting in release of cytochrome c into the cytosol. Binding of cytochrome c to Apaf-1 triggers the activation of caspase-9, which then accelerates apoptosis by activating other caspases (By similarity).

See Also

5df5, resolution 1.30Å

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