4ye1: Difference between revisions

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==A cytochrome c plus calixarene structure - alternative ligand binding mode==
==A cytochrome c plus calixarene structure - alternative ligand binding mode==
<StructureSection load='4ye1' size='340' side='right' caption='[[4ye1]], [[Resolution|resolution]] 1.39&Aring;' scene=''>
<StructureSection load='4ye1' size='340' side='right'caption='[[4ye1]], [[Resolution|resolution]] 1.39&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4ye1]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YE1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YE1 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4ye1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YE1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4YE1 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=T3Y:25,26,27,28-TETRAHYDROXYPENTACYCLO[19.3.1.1~3,7~.1~9,13~.1~15,19~]OCTACOSA-1(25),3(28),4,6,9(27),10,12,15(26),16,18,21,23-DODECAENE-5,11,17,23-TETRASULFONIC+ACID'>T3Y</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.39&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4n0k|4n0k]], [[3tyi|3tyi]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=T3Y:25,26,27,28-TETRAHYDROXYPENTACYCLO[19.3.1.1~3,7~.1~9,13~.1~15,19~]OCTACOSA-1(25),3(28),4,6,9(27),10,12,15(26),16,18,21,23-DODECAENE-5,11,17,23-TETRASULFONIC+ACID'>T3Y</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ye1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ye1 OCA], [http://pdbe.org/4ye1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ye1 RCSB], [http://www.ebi.ac.uk/pdbsum/4ye1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ye1 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ye1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ye1 OCA], [https://pdbe.org/4ye1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ye1 RCSB], [https://www.ebi.ac.uk/pdbsum/4ye1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ye1 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/CYC1_YEAST CYC1_YEAST]] Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.  
[https://www.uniprot.org/uniprot/CYC1_YEAST CYC1_YEAST] Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
 
==See Also==
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Crowley, P B]]
[[Category: Large Structures]]
[[Category: Mallon, M M]]
[[Category: Saccharomyces cerevisiae S288C]]
[[Category: McCarty, A A]]
[[Category: Crowley PB]]
[[Category: McGovern, R E]]
[[Category: Mallon MM]]
[[Category: Electron transport]]
[[Category: McCarty AA]]
[[Category: Lysine binding]]
[[Category: McGovern RE]]
[[Category: Protein surface recognition]]

Latest revision as of 13:54, 10 January 2024

A cytochrome c plus calixarene structure - alternative ligand binding modeA cytochrome c plus calixarene structure - alternative ligand binding mode

Structural highlights

4ye1 is a 2 chain structure with sequence from Saccharomyces cerevisiae S288C. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.39Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CYC1_YEAST Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.

See Also

4ye1, resolution 1.39Å

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