4usc: Difference between revisions

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 ==Crystal structure of peroxidase from palm tree Chamaerops excelsa==
-<StructureSection load='4usc' size='340' side='right' caption='[[4usc]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+<StructureSection load='4usc' size='340' side='right'caption='[[4usc]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4usc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trachycarpus_fortunei Trachycarpus fortunei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4USC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4USC FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4usc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trachycarpus_fortunei Trachycarpus fortunei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4USC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4USC FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PEO:HYDROGEN+PEROXIDE'>PEO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4usc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4usc OCA], [http://pdbe.org/4usc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4usc RCSB], [http://www.ebi.ac.uk/pdbsum/4usc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4usc ProSAT]</span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PEO:HYDROGEN+PEROXIDE'>PEO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4usc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4usc OCA], [https://pdbe.org/4usc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4usc RCSB], [https://www.ebi.ac.uk/pdbsum/4usc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4usc ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/A0A0A0Y4H8_TRAFO A0A0A0Y4H8_TRAFO] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.[RuleBase:RU362060]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 20: / Line 23: @@
 __TOC__
 </StructureSection>
+[[Category: Large Structures]]
 [[Category: Trachycarpus fortunei]]
-[[Category: Bernardes, A]]
+[[Category: Bernardes A]]
-[[Category: Cuadrado, N H]]
+[[Category: Cuadrado NH]]
-[[Category: Kostetsky, E Y]]
+[[Category: Kostetsky EY]]
-[[Category: Muniz, J R.C]]
+[[Category: Muniz JRC]]
-[[Category: Polikarpov, I]]
+[[Category: Polikarpov I]]
-[[Category: Roig, M G]]
+[[Category: Roig MG]]
-[[Category: Santos, J C]]
+[[Category: Santos JC]]
-[[Category: Shnyrov, V L]]
+[[Category: Shnyrov VL]]
-[[Category: Textor, L C]]
+[[Category: Textor LC]]
-[[Category: Glycosylation]]
-[[Category: Oxidoreductase]]
-[[Category: Plant peroxidase]]