4p7x: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==L-pipecolic acid-bound L-proline cis-4-hydroxylase==
-<StructureSection load='4p7x' size='340' side='right' caption='[[4p7x]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
+<StructureSection load='4p7x' size='340' side='right'caption='[[4p7x]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4p7x]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P7X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4P7X FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4p7x]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mesorhizobium_japonicum_MAFF_303099 Mesorhizobium japonicum MAFF 303099]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P7X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4P7X FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=CXS:3-CYCLOHEXYL-1-PROPYLSULFONIC+ACID'>CXS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=YCP:(2S)-PIPERIDINE-2-CARBOXYLIC+ACID'>YCP</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p7x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p7x OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4p7x RCSB], [http://www.ebi.ac.uk/pdbsum/4p7x PDBsum]</span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=CXS:3-CYCLOHEXYL-1-PROPYLSULFONIC+ACID'>CXS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=YCP:(2S)-PIPERIDINE-2-CARBOXYLIC+ACID'>YCP</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4p7x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p7x OCA], [https://pdbe.org/4p7x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4p7x RCSB], [https://www.ebi.ac.uk/pdbsum/4p7x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4p7x ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/P4H_RHILO P4H_RHILO]] Dioxygenase that catalyzes the 2-oxoglutarate-dependent selective hydroxylation of free L-proline to cis-4-hydroxy-L-proline (cis-4-Hyp).<ref>PMID:19133227</ref>
+[https://www.uniprot.org/uniprot/P4H_RHILO P4H_RHILO] Dioxygenase that catalyzes the 2-oxoglutarate-dependent selective hydroxylation of free L-proline to cis-4-hydroxy-L-proline (cis-4-Hyp).<ref>PMID:19133227</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 16: / Line 18: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 4p7x" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Hydroxylases 3D structures|Hydroxylases 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Hara, R]]
+[[Category: Large Structures]]
-[[Category: Hayashi, M]]
+[[Category: Mesorhizobium japonicum MAFF 303099]]
-[[Category: Higuchi, Y]]
+[[Category: Hara R]]
-[[Category: Kino, K]]
+[[Category: Hayashi M]]
-[[Category: Koketsu, K]]
+[[Category: Higuchi Y]]
-[[Category: Mitsuhashi, S]]
+[[Category: Kino K]]
-[[Category: Moriwaki, K]]
+[[Category: Koketsu K]]
-[[Category: Shomura, Y]]
+[[Category: Mitsuhashi S]]
-[[Category: Hydroxylase]]
+[[Category: Moriwaki K]]
-[[Category: Proline]]
+[[Category: Shomura Y]]