4ow6: Difference between revisions
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==Crystal structure of Diphtheria Toxin at acidic pH== | ==Crystal structure of Diphtheria Toxin at acidic pH== | ||
<StructureSection load='4ow6' size='340' side='right' caption='[[4ow6]], [[Resolution|resolution]] 2.80Å' scene=''> | <StructureSection load='4ow6' size='340' side='right'caption='[[4ow6]], [[Resolution|resolution]] 2.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4ow6]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[4ow6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_diphtheriae_C7_(beta) Corynebacterium diphtheriae C7 (beta)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OW6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OW6 FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ow6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ow6 OCA], [https://pdbe.org/4ow6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ow6 RCSB], [https://www.ebi.ac.uk/pdbsum/4ow6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ow6 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
<div class="pdbe-citations 4ow6" style="background-color:#fffaf0;"></div> | |||
==See Also== | ==See Also== | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Berto | [[Category: Berto P]] | ||
[[Category: Leka | [[Category: Leka O]] | ||
[[Category: Montecucco | [[Category: Montecucco C]] | ||
[[Category: Pirazzini | [[Category: Pirazzini M]] | ||
[[Category: Vallese | [[Category: Vallese F]] | ||
[[Category: Zanotti | [[Category: Zanotti G]] | ||
Latest revision as of 03:37, 28 December 2023
Crystal structure of Diphtheria Toxin at acidic pHCrystal structure of Diphtheria Toxin at acidic pH
Structural highlights
Publication Abstract from PubMedDiphtheria toxin (DT), the etiological agent of the homonymous disease, like other bacterial toxins has to undergo a dramatic structural change in order to be internalized into the cytosol, where it finally performs its function. The molecular mechanism of toxin transit across the membrane is ill-known, but available experimental evidences indicate that one of the three domains of the toxin, called domain T, inserts into the lipid bilayer, so favouring the translocation of the catalytic domain C. This process is driven by the acidic pH of the endosomal lumen. Here, we describe the crystal structure of DT grown at acidic pH in the presence of bicelles. We were unable to freeze the moment of DT insertion into the lipid bilayer, but our crystal structure indicates that the low pH causes the unfolding of alpha-helices TH2, TH3 and TH4. This event gives rise to the exposure of a hydrophobic surface that includes alpha-helices TH5, TH8 and the loop region connecting alpha-helices TH8 and TH9. Their exposure is probably favored by the presence of lipid bilayers in the crystallization solution, and they appear to be ready to insert into the membrane. This article is protected by copyright. All rights reserved. Diphtheria Toxin conformational switching at acidic pH.,Leka O, Vallese F, Pirazzini M, Berto P, Montecucco C, Zanotti G FEBS J. 2014 Mar 15. doi: 10.1111/febs.12783. PMID:24628974[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See AlsoReferences
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