3nmj: Difference between revisions

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[[Image:3nmj.png|left|200px]]


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==Crystal structure of a nickel mediated dimer for the phenanthroline-modified cytochrome cb562 variant, MBP-Phen2==
The line below this paragraph, containing "STRUCTURE_3nmj", creates the "Structure Box" on the page.
<StructureSection load='3nmj' size='340' side='right'caption='[[3nmj]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3nmj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NMJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NMJ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PXX:N-1,10-PHENANTHROLIN-5-YLACETAMIDE'>PXX</scene></td></tr>
{{STRUCTURE_3nmj|  PDB=3nmj  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nmj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nmj OCA], [https://pdbe.org/3nmj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nmj RCSB], [https://www.ebi.ac.uk/pdbsum/3nmj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nmj ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/C562_ECOLX C562_ECOLX] Electron-transport protein of unknown function.
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Described is an engineered metal-binding protein, MBPPhen2, which forms porous crystalline frameworks that feature coordinatively unsaturated Zn- and Ni-centers.


===Crystal structure of a nickel mediated dimer for the phenanthroline-modified cytochrome cb562 variant, MBP-Phen2===
Porous protein frameworks with unsaturated metal centers in sterically encumbered coordination sites.,Radford RJ, Lawrenz M, Nguyen PC, McCammon JA, Tezcan FA Chem Commun (Camb). 2010 Aug 25. PMID:20740227<ref>PMID:20740227</ref>


From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 3nmj" style="background-color:#fffaf0;"></div>


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==See Also==
The line below this paragraph, {{ABSTRACT_PUBMED_20740227}}, adds the Publication Abstract to the page
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 20740227 is the PubMed ID number.
*[[Cytochrome b5 3D structures|Cytochrome b5 3D structures]]
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== References ==
{{ABSTRACT_PUBMED_20740227}}
<references/>
 
__TOC__
==About this Structure==
</StructureSection>
[[3nmj]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NMJ OCA].
 
==Reference==
<ref group="xtra">PMID:20740227</ref><references group="xtra"/>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Radford, R J.]]
[[Category: Large Structures]]
[[Category: Tezcan, F A.]]
[[Category: Radford RJ]]
[[Category: 4-helix-bundle]]
[[Category: Tezcan FA]]
[[Category: Electron transport]]

Latest revision as of 03:32, 28 December 2023

Crystal structure of a nickel mediated dimer for the phenanthroline-modified cytochrome cb562 variant, MBP-Phen2Crystal structure of a nickel mediated dimer for the phenanthroline-modified cytochrome cb562 variant, MBP-Phen2

Structural highlights

3nmj is a 4 chain structure with sequence from Escherichia coli. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.1Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

C562_ECOLX Electron-transport protein of unknown function.

Publication Abstract from PubMed

Described is an engineered metal-binding protein, MBPPhen2, which forms porous crystalline frameworks that feature coordinatively unsaturated Zn- and Ni-centers.

Porous protein frameworks with unsaturated metal centers in sterically encumbered coordination sites.,Radford RJ, Lawrenz M, Nguyen PC, McCammon JA, Tezcan FA Chem Commun (Camb). 2010 Aug 25. PMID:20740227[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. ↑ Radford RJ, Lawrenz M, Nguyen PC, McCammon JA, Tezcan FA. Porous protein frameworks with unsaturated metal centers in sterically encumbered coordination sites. Chem Commun (Camb). 2010 Aug 25. PMID:20740227 doi:10.1039/c0cc02168g

3nmj, resolution 3.10Å

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