3erm: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:


==The crystal structure of a conserved protein with unknown function from Pseudomonas syringae pv. tomato str. DC3000==
==The crystal structure of a conserved protein with unknown function from Pseudomonas syringae pv. tomato str. DC3000==
<StructureSection load='3erm' size='340' side='right' caption='[[3erm]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
<StructureSection load='3erm' size='340' side='right'caption='[[3erm]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3erm]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/"pseudomonas_tomato"_(okabe_1933)_alstatt_1944 "pseudomonas tomato" (okabe 1933) alstatt 1944]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ERM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ERM FirstGlance]. <br>
<table><tr><td colspan='2'>[[3erm]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato Pseudomonas syringae pv. tomato]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ERM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ERM FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Pseudomonas syringae pv. tomato, PSPTO1197, PSPTO_1197 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=323 "Pseudomonas tomato" (Okabe 1933) Alstatt 1944])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3erm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3erm OCA], [https://pdbe.org/3erm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3erm RCSB], [https://www.ebi.ac.uk/pdbsum/3erm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3erm ProSAT], [https://www.topsan.org/Proteins/MCSG/3erm TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3erm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3erm OCA], [http://pdbe.org/3erm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3erm RCSB], [http://www.ebi.ac.uk/pdbsum/3erm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3erm ProSAT], [http://www.topsan.org/Proteins/MCSG/3erm TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q887T9_PSESM Q887T9_PSESM]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 21: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Clancy, S]]
[[Category: Large Structures]]
[[Category: Joachimiak, A]]
[[Category: Pseudomonas syringae pv. tomato]]
[[Category: Structural genomic]]
[[Category: Clancy S]]
[[Category: Tan, K]]
[[Category: Joachimiak A]]
[[Category: Zhou, M]]
[[Category: Tan K]]
[[Category: Apc85034]]
[[Category: Zhou M]]
[[Category: Mcsg]]
[[Category: Ppspto1197]]
[[Category: PSI, Protein structure initiative]]
[[Category: Seudomonas syringae pv. tomato str. dc3000]]
[[Category: Unknown function]]

Latest revision as of 03:23, 28 December 2023

The crystal structure of a conserved protein with unknown function from Pseudomonas syringae pv. tomato str. DC3000The crystal structure of a conserved protein with unknown function from Pseudomonas syringae pv. tomato str. DC3000

Structural highlights

3erm is a 5 chain structure with sequence from Pseudomonas syringae pv. tomato. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.45Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q887T9_PSESM

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3erm, resolution 2.45Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3erm&oldid=4008873"