2ols: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
==The crystal structure of the phosphoenolpyruvate synthase from Neisseria meningitidis==
==The crystal structure of the phosphoenolpyruvate synthase from Neisseria meningitidis==
<StructureSection load='2ols' size='340' side='right' caption='[[2ols]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='2ols' size='340' side='right'caption='[[2ols]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2ols]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OLS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OLS FirstGlance]. <br>
<table><tr><td colspan='2'>[[2ols]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_MC58 Neisseria meningitidis MC58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OLS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OLS FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ppsA, NMB0618 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=487 Neisseria meningitidis])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pyruvate,_water_dikinase Pyruvate, water dikinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.9.2 2.7.9.2] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ols FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ols OCA], [https://pdbe.org/2ols PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ols RCSB], [https://www.ebi.ac.uk/pdbsum/2ols PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ols ProSAT], [https://www.topsan.org/Proteins/MCSG/2ols TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ols FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ols OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ols RCSB], [http://www.ebi.ac.uk/pdbsum/2ols PDBsum], [http://www.topsan.org/Proteins/MCSG/2ols TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PPSA_NEIMB PPSA_NEIMB] Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ol/2ols_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ol/2ols_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ols ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Neisseria meningitidis]]
[[Category: Large Structures]]
[[Category: Pyruvate, water dikinase]]
[[Category: Neisseria meningitidis MC58]]
[[Category: Bargassa, M]]
[[Category: Bargassa M]]
[[Category: Duggan, E]]
[[Category: Duggan E]]
[[Category: Joachimiak, A]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Zhang R]]
[[Category: Zhang, R]]
[[Category: Mcsg]]
[[Category: Neisseria meningitidi]]
[[Category: PSI, Protein structure initiative]]
[[Category: The phosphoenolpyruvate synthase]]
[[Category: Transferase]]

Latest revision as of 03:20, 28 December 2023

The crystal structure of the phosphoenolpyruvate synthase from Neisseria meningitidisThe crystal structure of the phosphoenolpyruvate synthase from Neisseria meningitidis

Structural highlights

2ols is a 1 chain structure with sequence from Neisseria meningitidis MC58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

PPSA_NEIMB Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2ols, resolution 2.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA