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[[Image:2okq.gif|left|200px]]


{{Structure
==Crystal structure of unknown conserved ybaA protein from Shigella flexneri==
|PDB= 2okq |SIZE=350|CAPTION= <scene name='initialview01'>2okq</scene>, resolution 1.80&Aring;
<StructureSection load='2okq' size='340' side='right'caption='[[2okq]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>
<table><tr><td colspan='2'>[[2okq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OKQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OKQ FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
|GENE= ybaA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 Shigella flexneri])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG5507 COG5507]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2okq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2okq OCA], [https://pdbe.org/2okq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2okq RCSB], [https://www.ebi.ac.uk/pdbsum/2okq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2okq ProSAT], [https://www.topsan.org/Proteins/MCSG/2okq TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2okq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2okq OCA], [http://www.ebi.ac.uk/pdbsum/2okq PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2okq RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/YBAA_SHIFL YBAA_SHIFL]
 
== Evolutionary Conservation ==
'''Crystal structure of unknown conserved ybaA protein from Shigella flexneri'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ok/2okq_consurf.spt"</scriptWhenChecked>
2OKQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OKQ OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2okq ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Shigella flexneri]]
[[Category: Shigella flexneri]]
[[Category: Single protein]]
[[Category: Anderson WF]]
[[Category: Anderson, W F.]]
[[Category: Brunzelle JS]]
[[Category: Brunzelle, J S.]]
[[Category: Collart FR]]
[[Category: Collart, F R.]]
[[Category: Joachimiak A]]
[[Category: Joachimiak, A.]]
[[Category: Kiryukhina O]]
[[Category: Kiryukhina, O.]]
[[Category: Minasov G]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Shuvalova L]]
[[Category: Minasov, G.]]
[[Category: Vorontsov II]]
[[Category: Shuvalova, L.]]
[[Category: Vorontsov, I I.]]
[[Category: crystal structure]]
[[Category: mcsg]]
[[Category: midwest center for structural genomic]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
[[Category: ybaa protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:19:11 2008''

Latest revision as of 03:19, 28 December 2023

Crystal structure of unknown conserved ybaA protein from Shigella flexneriCrystal structure of unknown conserved ybaA protein from Shigella flexneri

Structural highlights

2okq is a 2 chain structure with sequence from Shigella flexneri. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.8Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

YBAA_SHIFL

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2okq, resolution 1.80Å

Drag the structure with the mouse to rotate

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OCA
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