2o3a: Difference between revisions

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[[Image:2o3a.png|left|200px]]


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==Crystal structure of a protein AF_0751 from Archaeoglobus fulgidus==
The line below this paragraph, containing "STRUCTURE_2o3a", creates the "Structure Box" on the page.
<StructureSection load='2o3a' size='340' side='right'caption='[[2o3a]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2o3a]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O3A FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o3a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o3a OCA], [https://pdbe.org/2o3a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o3a RCSB], [https://www.ebi.ac.uk/pdbsum/2o3a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o3a ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2o3a TOPSAN]</span></td></tr>
{{STRUCTURE_2o3a|  PDB=2o3a  |  SCENE=  }}
</table>
 
== Function ==
===Crystal structure of a protein AF_0751 from Archaeoglobus fulgidus===
[https://www.uniprot.org/uniprot/TRM56_ARCFU TRM56_ARCFU] Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs.
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2O3A is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3A OCA].  
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o3/2o3a_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o3a ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Archaeoglobus fulgidus]]
[[Category: Archaeoglobus fulgidus]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Almo, S C.]]
[[Category: Almo SC]]
[[Category: Bain, K T.]]
[[Category: Bain KT]]
[[Category: Bonanno, J B.]]
[[Category: Bonanno JB]]
[[Category: Burley, S K.]]
[[Category: Burley SK]]
[[Category: Dickey, M.]]
[[Category: Dickey M]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Sauder JM]]
[[Category: Sauder, M J.]]
[[Category: Slocombe A]]
[[Category: Slocombe, A.]]
[[Category: Sridhar V]]
[[Category: Sridhar, V.]]
[[Category: Wu B]]
[[Category: Wu, B.]]
[[Category: New york structural genomix research consortium]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 18:07:03 2008''

Latest revision as of 03:13, 28 December 2023

Crystal structure of a protein AF_0751 from Archaeoglobus fulgidusCrystal structure of a protein AF_0751 from Archaeoglobus fulgidus

Structural highlights

2o3a is a 2 chain structure with sequence from Archaeoglobus fulgidus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

TRM56_ARCFU Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2o3a, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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