2nr4: Difference between revisions

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-{{Seed}}
-[[Image:2nr4.png|left|200px]]
-<!--
+==Crystal structure of FMN-bound protein MM1853 from Methanosarcina mazei, Pfam DUF447==
-The line below this paragraph, containing "STRUCTURE_2nr4", creates the "Structure Box" on the page.
+<StructureSection load='2nr4' size='340' side='right'caption='[[2nr4]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2nr4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanosarcina_mazei Methanosarcina mazei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NR4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NR4 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-{{STRUCTURE_2nr4|  PDB=2nr4  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nr4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nr4 OCA], [https://pdbe.org/2nr4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nr4 RCSB], [https://www.ebi.ac.uk/pdbsum/2nr4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nr4 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2nr4 TOPSAN]</span></td></tr>
+</table>
-===Crystal structure of FMN-bound protein MM1853 from Methanosarcina mazei, Pfam DUF447===
+== Function ==
+[https://www.uniprot.org/uniprot/Q8PVV4_METMA Q8PVV4_METMA]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-NR4 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Methanosarcina_mazei Methanosarcina mazei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NR4 OCA].
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nr/2nr4_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nr4 ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Methanosarcina mazei]]
-[[Category: Almo, S C.]]
+[[Category: Almo SC]]
-[[Category: Bain, K T.]]
+[[Category: Bain KT]]
-[[Category: Bonanno, J B.]]
+[[Category: Bonanno JB]]
-[[Category: Burley, S K.]]
+[[Category: Burley SK]]
-[[Category: Gilmore, J.]]
+[[Category: Gilmore J]]
-[[Category: Lau, C.]]
+[[Category: Lau C]]
-[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+[[Category: Sauder JM]]
-[[Category: Sauder, M J.]]
+[[Category: Smith D]]
-[[Category: Smith, D.]]
+[[Category: Wasserman S]]
-[[Category: Wasserman, S.]]
-[[Category: Flavoprotein]]
-[[Category: New york structural genomix research consortium]]
-[[Category: Nysgxrc]]
-[[Category: Protein structure initiative]]
-[[Category: Psi-2]]
-[[Category: Structural genomic]]
-[[Category: Unknown function]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 17:47:29 2008''