2nr4: Difference between revisions

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[[Image:2nr4.gif|left|200px]]


{{Structure
==Crystal structure of FMN-bound protein MM1853 from Methanosarcina mazei, Pfam DUF447==
|PDB= 2nr4 |SIZE=350|CAPTION= <scene name='initialview01'>2nr4</scene>, resolution 1.850&Aring;
<StructureSection load='2nr4' size='340' side='right'caption='[[2nr4]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>
<table><tr><td colspan='2'>[[2nr4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanosarcina_mazei Methanosarcina mazei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NR4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NR4 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
|GENE= MM_1853 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2209 Methanosarcina mazei])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2457 COG2457]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nr4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nr4 OCA], [https://pdbe.org/2nr4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nr4 RCSB], [https://www.ebi.ac.uk/pdbsum/2nr4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nr4 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2nr4 TOPSAN]</span></td></tr>
|RELATEDENTRY=[[2iml|2IML]]
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2nr4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nr4 OCA], [http://www.ebi.ac.uk/pdbsum/2nr4 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2nr4 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q8PVV4_METMA Q8PVV4_METMA]
 
== Evolutionary Conservation ==
'''Crystal structure of FMN-bound protein MM1853 from Methanosarcina mazei, Pfam DUF447'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nr/2nr4_consurf.spt"</scriptWhenChecked>
2NR4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Methanosarcina_mazei Methanosarcina mazei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NR4 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nr4 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Methanosarcina mazei]]
[[Category: Methanosarcina mazei]]
[[Category: Single protein]]
[[Category: Almo SC]]
[[Category: Almo, S C.]]
[[Category: Bain KT]]
[[Category: Bain, K T.]]
[[Category: Bonanno JB]]
[[Category: Bonanno, J B.]]
[[Category: Burley SK]]
[[Category: Burley, S K.]]
[[Category: Gilmore J]]
[[Category: Gilmore, J.]]
[[Category: Lau C]]
[[Category: Lau, C.]]
[[Category: Sauder JM]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Smith D]]
[[Category: Sauder, M J.]]
[[Category: Wasserman S]]
[[Category: Smith, D.]]
[[Category: Wasserman, S.]]
[[Category: flavoprotein]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgxrc]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
[[Category: unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:07:04 2008''

Latest revision as of 03:10, 28 December 2023

Crystal structure of FMN-bound protein MM1853 from Methanosarcina mazei, Pfam DUF447Crystal structure of FMN-bound protein MM1853 from Methanosarcina mazei, Pfam DUF447

Structural highlights

2nr4 is a 2 chain structure with sequence from Methanosarcina mazei. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.85Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q8PVV4_METMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2nr4, resolution 1.85Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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