2nr4: Difference between revisions

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==Crystal structure of FMN-bound protein MM1853 from Methanosarcina mazei, Pfam DUF447==
==Crystal structure of FMN-bound protein MM1853 from Methanosarcina mazei, Pfam DUF447==
<StructureSection load='2nr4' size='340' side='right' caption='[[2nr4]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
<StructureSection load='2nr4' size='340' side='right'caption='[[2nr4]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2nr4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Dsm_2053 Dsm 2053]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NR4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2NR4 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2nr4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanosarcina_mazei Methanosarcina mazei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NR4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NR4 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2iml|2iml]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MM_1853 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2209 DSM 2053])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nr4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nr4 OCA], [https://pdbe.org/2nr4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nr4 RCSB], [https://www.ebi.ac.uk/pdbsum/2nr4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nr4 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2nr4 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2nr4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nr4 OCA], [http://pdbe.org/2nr4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2nr4 RCSB], [http://www.ebi.ac.uk/pdbsum/2nr4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2nr4 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/2nr4 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q8PVV4_METMA Q8PVV4_METMA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nr/2nr4_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nr/2nr4_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Dsm 2053]]
[[Category: Large Structures]]
[[Category: Almo, S C]]
[[Category: Methanosarcina mazei]]
[[Category: Bain, K T]]
[[Category: Almo SC]]
[[Category: Bonanno, J B]]
[[Category: Bain KT]]
[[Category: Burley, S K]]
[[Category: Bonanno JB]]
[[Category: Gilmore, J]]
[[Category: Burley SK]]
[[Category: Lau, C]]
[[Category: Gilmore J]]
[[Category: Structural genomic]]
[[Category: Lau C]]
[[Category: Sauder, J M]]
[[Category: Sauder JM]]
[[Category: Smith, D]]
[[Category: Smith D]]
[[Category: Wasserman, S]]
[[Category: Wasserman S]]
[[Category: Flavoprotein]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]

Latest revision as of 03:10, 28 December 2023

Crystal structure of FMN-bound protein MM1853 from Methanosarcina mazei, Pfam DUF447Crystal structure of FMN-bound protein MM1853 from Methanosarcina mazei, Pfam DUF447

Structural highlights

2nr4 is a 2 chain structure with sequence from Methanosarcina mazei. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.85Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q8PVV4_METMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2nr4, resolution 1.85Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA