1ve5: Difference between revisions

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New page: left|200px<br /><applet load="1ve5" size="450" color="white" frame="true" align="right" spinBox="true" caption="1ve5, resolution 2.15Å" /> '''Crystal Structure of...
 
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[[Image:1ve5.gif|left|200px]]<br /><applet load="1ve5" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1ve5, resolution 2.15&Aring;" />
'''Crystal Structure of T.th. HB8 Threonine deaminase'''<br />


==About this Structure==
==Crystal Structure of T.th. HB8 Threonine deaminase==
1VE5 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus] with CA and PLP as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Threonine_ammonia-lyase Threonine ammonia-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.1.19 4.3.1.19] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1VE5 OCA].  
<StructureSection load='1ve5' size='340' side='right'caption='[[1ve5]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Thermus thermophilus]]
<table><tr><td colspan='2'>[[1ve5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VE5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VE5 FirstGlance]. <br>
[[Category: Threonine ammonia-lyase]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
[[Category: Goto, M.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ve5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ve5 OCA], [https://pdbe.org/1ve5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ve5 RCSB], [https://www.ebi.ac.uk/pdbsum/1ve5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ve5 ProSAT], [https://www.topsan.org/Proteins/RSGI/1ve5 TOPSAN]</span></td></tr>
[[Category: CA]]
</table>
[[Category: PLP]]
== Function ==
[[Category: riken structural genomics/proteomics initiative]]
[https://www.uniprot.org/uniprot/Q5SLL4_THET8 Q5SLL4_THET8]  
[[Category: rsgi]]
== Evolutionary Conservation ==
[[Category: structural genomics]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: threonine deaminase catabolic]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ve/1ve5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ve5 ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sat Nov 24 22:16:22 2007''
==See Also==
*[[Deaminase 3D structures|Deaminase 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Goto M]]

Latest revision as of 03:02, 28 December 2023

Crystal Structure of T.th. HB8 Threonine deaminaseCrystal Structure of T.th. HB8 Threonine deaminase

Structural highlights

1ve5 is a 4 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.15Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SLL4_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1ve5, resolution 2.15Å

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OCA
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