1vbl: Difference between revisions

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[[Image:1vbl.png|left|200px]]


{{STRUCTURE_1vbl|  PDB=1vbl  |  SCENE=  }}
==Structure of the thermostable pectate lyase PL 47==
 
<StructureSection load='1vbl' size='340' side='right'caption='[[1vbl]], [[Resolution|resolution]] 1.91&Aring;' scene=''>
===Structure of the thermostable pectate lyase PL 47===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1vbl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._TS-47 Bacillus sp. TS-47]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VBL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VBL FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.91&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
[[1vbl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_sp._ts-47 Bacillus sp. ts-47]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VBL OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vbl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vbl OCA], [https://pdbe.org/1vbl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vbl RCSB], [https://www.ebi.ac.uk/pdbsum/1vbl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vbl ProSAT]</span></td></tr>
[[Category: Bacillus sp. ts-47]]
</table>
[[Category: Pectate lyase]]
== Function ==
[[Category: Kitatani, T.]]
[https://www.uniprot.org/uniprot/Q9AJM4_9BACI Q9AJM4_9BACI]  
[[Category: Nakaniwa, T.]]
== Evolutionary Conservation ==
[[Category: Nishimura, K.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Sakai, T.]]
Check<jmol>
[[Category: Tada, T.]]
  <jmolCheckbox>
[[Category: Takao, M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vb/1vbl_consurf.spt"</scriptWhenChecked>
[[Category: Yamaguchi, A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Bacillus subtili]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Calcium ion]]
  </jmolCheckbox>
[[Category: Lyase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vbl ConSurf].
[[Category: Pectate lyase]]
<div style="clear:both"></div>
[[Category: Pectin]]
__TOC__
[[Category: Pl 47]]
</StructureSection>
[[Category: Thermostable]]
[[Category: Bacillus sp. TS-47]]
[[Category: Large Structures]]
[[Category: Kitatani T]]
[[Category: Nakaniwa T]]
[[Category: Nishimura K]]
[[Category: Sakai T]]
[[Category: Tada T]]
[[Category: Takao M]]
[[Category: Yamaguchi A]]

Latest revision as of 03:01, 28 December 2023

Structure of the thermostable pectate lyase PL 47Structure of the thermostable pectate lyase PL 47

Structural highlights

1vbl is a 1 chain structure with sequence from Bacillus sp. TS-47. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.91Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q9AJM4_9BACI

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1vbl, resolution 1.91Å

Drag the structure with the mouse to rotate

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OCA