1v8d: Difference between revisions

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[[Image:1v8d.png|left|200px]]


{{STRUCTURE_1v8d|  PDB=1v8d  |  SCENE=  }}
==Crystal structure of the conserved hypothetical protein TT1679 from Thermus thermophilus==
 
<StructureSection load='1v8d' size='340' side='right'caption='[[1v8d]], [[Resolution|resolution]] 2.16&Aring;' scene=''>
===Crystal structure of the conserved hypothetical protein TT1679 from Thermus thermophilus===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1v8d]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V8D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1V8D FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.16&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
[[1v8d]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V8D OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1v8d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v8d OCA], [https://pdbe.org/1v8d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1v8d RCSB], [https://www.ebi.ac.uk/pdbsum/1v8d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1v8d ProSAT], [https://www.topsan.org/Proteins/RSGI/1v8d TOPSAN]</span></td></tr>
[[Category: Thermus thermophilus]]
</table>
[[Category: Kishishita, S.]]
== Function ==
[[Category: Kuramitsu, S.]]
[https://www.uniprot.org/uniprot/Y214_THET2 Y214_THET2]  
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
== Evolutionary Conservation ==
[[Category: Shirouzu, M.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Terada, T.]]
Check<jmol>
[[Category: Yokoyama, S.]]
  <jmolCheckbox>
[[Category: Hypothetical protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v8/1v8d_consurf.spt"</scriptWhenChecked>
[[Category: Riken structural genomics/proteomics initiative]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Rsgi]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Structural genomic]]
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1v8d ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Unknown function]]
[[Category: Kishishita S]]
[[Category: X-ray craytallography]]
[[Category: Kuramitsu S]]
[[Category: Shirouzu M]]
[[Category: Terada T]]
[[Category: Yokoyama S]]

Latest revision as of 02:59, 28 December 2023

Crystal structure of the conserved hypothetical protein TT1679 from Thermus thermophilusCrystal structure of the conserved hypothetical protein TT1679 from Thermus thermophilus

Structural highlights

1v8d is a 3 chain structure with sequence from Thermus thermophilus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.16Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Y214_THET2

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1v8d, resolution 2.16Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA